Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A4688 |
Symbol | |
ID | 3749894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | + |
Start bp | 1683390 |
End bp | 1685876 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637762983 |
Product | 3'-5' exoribonuclease, VacB and RNase II/ribonuclease R |
Protein accession | YP_368927 |
Protein GI | 78066158 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02063] ribonuclease R |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00492754 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.623158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAAAT ATCCGTACCC CATTCCGAGC CGTGAAGAAA TTCTCGGCGT GCTGCGTACG AGCGACGCGC CGCTGGCCGC CAACGACATC GCCGAAGCAC TGTCGATCAA GCGTCAGGAG CGCGAGGGGT TCTTCCGGCG TGTCGCCGCG ATGGAACGCG ACGGCCAGAT CCGCCTCGAC AAGCGCGGCC ATTACCAGTT GACCCATCCG TCGAACTTCG TCGCCGGGCG CGTGCAGGGG CATCGCGACG GCTACGGGTT CGTGATCCGC GACGACGGCC AGGACGACCT GTTTTTGCCG AACGGCGAAA TGCAGAAGGT GATGCACAAC GATCGCGTGC TCGCACGGAT CGTCGGCTAC GATCGTCGCG GCCGCCCGGA AGGGCACGTC GTCGAAGTCA CCGAGCGCGC GAACAAGCGC GTGATCGGCC GCCTGCTCAA CGAGAACGGC GCGCTGATCG TCGCACCGGA AGACAAGCGC ATCGGCCATG ACATCCTGAT CACGCAGAAC GTGAAGAAGG CGAAGGTCGG GCAGGTCGTC GTTGTCGAGC TGACCGATTT CCCGAGCCGC CATTCGCAGC CGCTCGGCCG TGTCGTCGAG GTGCTCGGCG ACATCGACGA TCCGGGCATG GAAATCGAAA TCGCGGTGCG CAAGTACGGC GTGCCGCACG AATTCAGCCA GCCGGCGCTC GACGAAGCCG CCGCGCTGCC CGACAAGGTG CGGCCGACCG ACCTGCGTTT CCGCGTCGAC CTGCGCGACG TGCCGCTCGT GACGATCGAC GGCGAGGACG CCCGCGACTT CGACGACGCC GTCTACTGCG AGCCGGTCAA GGTCGGCCGC GGCGACGGCT ACCGCCTGAT CGTCGCGATC GCCGACGTGT CGCACTACGT ACAGCCGGGC AGCGGGCTCG ATGCCGACGC GCTCGAGCGC AGCACGTCGG TCTACTTCCC GCGCCGTGTG ATTCCGATGC TGCCGGAGAA GCTGTCGAAC GGCCTGTGCT CGCTGAATCC GCAGGTCGAC CGCTGCGTGC TCGCGTGCGA CATGGTGATC ACCGCGCGCG GCGAGATCAA GGCGTACCAG TTTTATCCGG CCGTCATCCA TTCGGCTGCG CGCCTCACGT ACACCGAAGT CGCGGCCGTG CTGTCGAACA CGAAGGGGCC GGAGGCGGCG CGCCGCGCGG ATATTCTGCC GCACCTGCAG GATCTGTACG GCGTCTACAA GTCGCTGTTC GCCGCGCGGC AGAAGCGCGG CGCGATCGAC TTCGACACGA CCGAGACCTA CATCGTCTGC AACTCGCAGG GCAAGATCGA GCAGATCGTG CCGCGCCAGC GTAACGACGC GCACAAGCTG ATCGAGGAAT GCATGCTGGC CGCGAACGTC TGCGCGGCCG ATTTCCTGAA GCGCAACAAG CATCCGGGCC TGTACCGCGT GCACGCGGGG CCGACGCCGG AGAAGCTCGA GAACCTGCGC GCGTTCCTGC GCGGCATGGG CCTTTCGCTC GGTGGCGGCG ACAAGCCGCA TGCGAGCGAC TACGCGGCGC TGATGGCGCA GATCCGCGAC CGGCCCGATG CGCAGATGCT GCAGCCGATG TTGCTGCGCT CGATGCAGCA GGCCGTCTAC AGCCCGGACA ACATCGGTCA CTTCGGCCTG GCCTACGAGG CATACGCGCA CTTCACGAGC CCGATCCGCC GTTATCCGGA CTTGCTCACG CACCGCGCGA TCTACGCGAT CCTGTCCGGC AAGAAGTACA CGCCGAAGGC GCCGGACGGT TTCGAGCTGA ACACCGCGCT GTCGCCGCGC GCCCGCGCGA TGCAGCAGGC CGACGACGAA TCGCGCGGCC GCTCGCGCTC GAACACGGCG ATCTGGGAAG AACTCGGCCT GCACTGCTCG GCGAACGAGC GCCGCGCGGA TGAAGCATCG CGCGACGTCG AAGCCTGGCT CAAGTGCTAC TTCATGCGCG ACAAGCTCGG CGAGGAGTAC GGCGGGATGG TGAACGGCGT CACGTCGTTC GGCATCTTCG TGCAGCTCGA CACGCTCTTC ATCGAAGGGC TCGTGCACGT CACGGAACTC GGCTCGGACT ACTTCCAGTA CGACGAGATC AAGAACGAGC TGCGTGGCGA ACGCACGGGC ATCCGTTATC GCCTGTCGGA TCGCGTGCGC GTGCAGGTGA GCCGCGTCGA TCTCGATGCA CGCAAGATCG ATTTCCGGCT CGTGCGCGAT ACGCCGGTGA AGGCGCCGCG TCCGTCGCCC GTGCCGGCTT CCGCGGGTGG CGGTGTCGAC CGCGGCAATG GTCCGCGCGT ACGCGCACTG CCGCAGGCGG AGGAGCCCGC GCCGCGCCGC AAGAAGGCCG CAAGCGCGCC GAGCGTCGCG GTGAATGAAG CGCGCGCCGC GCGTGCCGCC GCGAAGAAGA AGGGCGGCAG CGGCAGCGGT GGCGGTGCGG CGGCGAAGCC GACCGCGAAG AAGACACGCG CCCGCAAGAA GTATTGA
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Protein sequence | MSKYPYPIPS REEILGVLRT SDAPLAANDI AEALSIKRQE REGFFRRVAA MERDGQIRLD KRGHYQLTHP SNFVAGRVQG HRDGYGFVIR DDGQDDLFLP NGEMQKVMHN DRVLARIVGY DRRGRPEGHV VEVTERANKR VIGRLLNENG ALIVAPEDKR IGHDILITQN VKKAKVGQVV VVELTDFPSR HSQPLGRVVE VLGDIDDPGM EIEIAVRKYG VPHEFSQPAL DEAAALPDKV RPTDLRFRVD LRDVPLVTID GEDARDFDDA VYCEPVKVGR GDGYRLIVAI ADVSHYVQPG SGLDADALER STSVYFPRRV IPMLPEKLSN GLCSLNPQVD RCVLACDMVI TARGEIKAYQ FYPAVIHSAA RLTYTEVAAV LSNTKGPEAA RRADILPHLQ DLYGVYKSLF AARQKRGAID FDTTETYIVC NSQGKIEQIV PRQRNDAHKL IEECMLAANV CAADFLKRNK HPGLYRVHAG PTPEKLENLR AFLRGMGLSL GGGDKPHASD YAALMAQIRD RPDAQMLQPM LLRSMQQAVY SPDNIGHFGL AYEAYAHFTS PIRRYPDLLT HRAIYAILSG KKYTPKAPDG FELNTALSPR ARAMQQADDE SRGRSRSNTA IWEELGLHCS ANERRADEAS RDVEAWLKCY FMRDKLGEEY GGMVNGVTSF GIFVQLDTLF IEGLVHVTEL GSDYFQYDEI KNELRGERTG IRYRLSDRVR VQVSRVDLDA RKIDFRLVRD TPVKAPRPSP VPASAGGGVD RGNGPRVRAL PQAEEPAPRR KKAASAPSVA VNEARAARAA AKKKGGSGSG GGAAAKPTAK KTRARKKY
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