| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4688 |
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| Symbol | |
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| ID | 3749894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | + |
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| Start bp | 1683390 |
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| End bp | 1685876 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637762983 |
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| Product | 3'-5' exoribonuclease, VacB and RNase II/ribonuclease R |
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| Protein accession | YP_368927 |
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| Protein GI | 78066158 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00492754 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.623158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAAAT ATCCGTACCC CATTCCGAGC CGTGAAGAAA TTCTCGGCGT GCTGCGTACG
AGCGACGCGC CGCTGGCCGC CAACGACATC GCCGAAGCAC TGTCGATCAA GCGTCAGGAG
CGCGAGGGGT TCTTCCGGCG TGTCGCCGCG ATGGAACGCG ACGGCCAGAT CCGCCTCGAC
AAGCGCGGCC ATTACCAGTT GACCCATCCG TCGAACTTCG TCGCCGGGCG CGTGCAGGGG
CATCGCGACG GCTACGGGTT CGTGATCCGC GACGACGGCC AGGACGACCT GTTTTTGCCG
AACGGCGAAA TGCAGAAGGT GATGCACAAC GATCGCGTGC TCGCACGGAT CGTCGGCTAC
GATCGTCGCG GCCGCCCGGA AGGGCACGTC GTCGAAGTCA CCGAGCGCGC GAACAAGCGC
GTGATCGGCC GCCTGCTCAA CGAGAACGGC GCGCTGATCG TCGCACCGGA AGACAAGCGC
ATCGGCCATG ACATCCTGAT CACGCAGAAC GTGAAGAAGG CGAAGGTCGG GCAGGTCGTC
GTTGTCGAGC TGACCGATTT CCCGAGCCGC CATTCGCAGC CGCTCGGCCG TGTCGTCGAG
GTGCTCGGCG ACATCGACGA TCCGGGCATG GAAATCGAAA TCGCGGTGCG CAAGTACGGC
GTGCCGCACG AATTCAGCCA GCCGGCGCTC GACGAAGCCG CCGCGCTGCC CGACAAGGTG
CGGCCGACCG ACCTGCGTTT CCGCGTCGAC CTGCGCGACG TGCCGCTCGT GACGATCGAC
GGCGAGGACG CCCGCGACTT CGACGACGCC GTCTACTGCG AGCCGGTCAA GGTCGGCCGC
GGCGACGGCT ACCGCCTGAT CGTCGCGATC GCCGACGTGT CGCACTACGT ACAGCCGGGC
AGCGGGCTCG ATGCCGACGC GCTCGAGCGC AGCACGTCGG TCTACTTCCC GCGCCGTGTG
ATTCCGATGC TGCCGGAGAA GCTGTCGAAC GGCCTGTGCT CGCTGAATCC GCAGGTCGAC
CGCTGCGTGC TCGCGTGCGA CATGGTGATC ACCGCGCGCG GCGAGATCAA GGCGTACCAG
TTTTATCCGG CCGTCATCCA TTCGGCTGCG CGCCTCACGT ACACCGAAGT CGCGGCCGTG
CTGTCGAACA CGAAGGGGCC GGAGGCGGCG CGCCGCGCGG ATATTCTGCC GCACCTGCAG
GATCTGTACG GCGTCTACAA GTCGCTGTTC GCCGCGCGGC AGAAGCGCGG CGCGATCGAC
TTCGACACGA CCGAGACCTA CATCGTCTGC AACTCGCAGG GCAAGATCGA GCAGATCGTG
CCGCGCCAGC GTAACGACGC GCACAAGCTG ATCGAGGAAT GCATGCTGGC CGCGAACGTC
TGCGCGGCCG ATTTCCTGAA GCGCAACAAG CATCCGGGCC TGTACCGCGT GCACGCGGGG
CCGACGCCGG AGAAGCTCGA GAACCTGCGC GCGTTCCTGC GCGGCATGGG CCTTTCGCTC
GGTGGCGGCG ACAAGCCGCA TGCGAGCGAC TACGCGGCGC TGATGGCGCA GATCCGCGAC
CGGCCCGATG CGCAGATGCT GCAGCCGATG TTGCTGCGCT CGATGCAGCA GGCCGTCTAC
AGCCCGGACA ACATCGGTCA CTTCGGCCTG GCCTACGAGG CATACGCGCA CTTCACGAGC
CCGATCCGCC GTTATCCGGA CTTGCTCACG CACCGCGCGA TCTACGCGAT CCTGTCCGGC
AAGAAGTACA CGCCGAAGGC GCCGGACGGT TTCGAGCTGA ACACCGCGCT GTCGCCGCGC
GCCCGCGCGA TGCAGCAGGC CGACGACGAA TCGCGCGGCC GCTCGCGCTC GAACACGGCG
ATCTGGGAAG AACTCGGCCT GCACTGCTCG GCGAACGAGC GCCGCGCGGA TGAAGCATCG
CGCGACGTCG AAGCCTGGCT CAAGTGCTAC TTCATGCGCG ACAAGCTCGG CGAGGAGTAC
GGCGGGATGG TGAACGGCGT CACGTCGTTC GGCATCTTCG TGCAGCTCGA CACGCTCTTC
ATCGAAGGGC TCGTGCACGT CACGGAACTC GGCTCGGACT ACTTCCAGTA CGACGAGATC
AAGAACGAGC TGCGTGGCGA ACGCACGGGC ATCCGTTATC GCCTGTCGGA TCGCGTGCGC
GTGCAGGTGA GCCGCGTCGA TCTCGATGCA CGCAAGATCG ATTTCCGGCT CGTGCGCGAT
ACGCCGGTGA AGGCGCCGCG TCCGTCGCCC GTGCCGGCTT CCGCGGGTGG CGGTGTCGAC
CGCGGCAATG GTCCGCGCGT ACGCGCACTG CCGCAGGCGG AGGAGCCCGC GCCGCGCCGC
AAGAAGGCCG CAAGCGCGCC GAGCGTCGCG GTGAATGAAG CGCGCGCCGC GCGTGCCGCC
GCGAAGAAGA AGGGCGGCAG CGGCAGCGGT GGCGGTGCGG CGGCGAAGCC GACCGCGAAG
AAGACACGCG CCCGCAAGAA GTATTGA
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| Protein sequence | MSKYPYPIPS REEILGVLRT SDAPLAANDI AEALSIKRQE REGFFRRVAA MERDGQIRLD
KRGHYQLTHP SNFVAGRVQG HRDGYGFVIR DDGQDDLFLP NGEMQKVMHN DRVLARIVGY
DRRGRPEGHV VEVTERANKR VIGRLLNENG ALIVAPEDKR IGHDILITQN VKKAKVGQVV
VVELTDFPSR HSQPLGRVVE VLGDIDDPGM EIEIAVRKYG VPHEFSQPAL DEAAALPDKV
RPTDLRFRVD LRDVPLVTID GEDARDFDDA VYCEPVKVGR GDGYRLIVAI ADVSHYVQPG
SGLDADALER STSVYFPRRV IPMLPEKLSN GLCSLNPQVD RCVLACDMVI TARGEIKAYQ
FYPAVIHSAA RLTYTEVAAV LSNTKGPEAA RRADILPHLQ DLYGVYKSLF AARQKRGAID
FDTTETYIVC NSQGKIEQIV PRQRNDAHKL IEECMLAANV CAADFLKRNK HPGLYRVHAG
PTPEKLENLR AFLRGMGLSL GGGDKPHASD YAALMAQIRD RPDAQMLQPM LLRSMQQAVY
SPDNIGHFGL AYEAYAHFTS PIRRYPDLLT HRAIYAILSG KKYTPKAPDG FELNTALSPR
ARAMQQADDE SRGRSRSNTA IWEELGLHCS ANERRADEAS RDVEAWLKCY FMRDKLGEEY
GGMVNGVTSF GIFVQLDTLF IEGLVHVTEL GSDYFQYDEI KNELRGERTG IRYRLSDRVR
VQVSRVDLDA RKIDFRLVRD TPVKAPRPSP VPASAGGGVD RGNGPRVRAL PQAEEPAPRR
KKAASAPSVA VNEARAARAA AKKKGGSGSG GGAAAKPTAK KTRARKKY
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