Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A4661 |
Symbol | |
ID | 3749864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | + |
Start bp | 1651733 |
End bp | 1653064 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637762953 |
Product | Flp pilus assembly protein secretin CpaC |
Protein accession | YP_368900 |
Protein GI | 78066131 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000794738 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00340482 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAGA AACTGATTGG ATTAGCTATT GCATTGAGCG CGCTGGCCAT GCCGCCGCTG TCGGGCGCGG CCGACACGAG CGGGACGATC AGCCTGGCGG TCGGCGCACA ACGGCAGCTC GCGACGGGGC GTGCGCTGCA GCGGGTTGCG GTCGGCGATC CGTCGGTCGC CGACGTGATG GTCGTGAAGG GCGGGCGTGG CGGTGTCCTG CTGATAGCGA AGAGCGCCGG CGCGACGAAC GTGATGATCT GGGAGCGCGG TCACGACGAA CCGACCGTCT ACAACGTGAG CGTCACGAGC GGCGCGGCGC GTGCGTTGCT TGACGGTGGG ACGTCGAGCG TGAATACGTA CGGCGGCACG ACGGTGATCG GCGGTGCGTC CGGGTCGCTC GACGGGCATC AGCGGGCGGT TCATGCGGCG AAGACGGTCA GCGGCAAGGA CGGGACGACG ATCGATGCGT CGACGATCTC CGGCAAGAAC GTCGTGCAGG TCGATGTGCG CGTCGTCGAA TTCAGCCGTT CGGTGCTGAA GCAGGCAGGG CTGAACTTCT TCAAGCAAAG CAACGGTTTT TCGTTCGGTG CCTTCGCGCC GACCGGGCTC ACGTCGATTA CCGGTTCGCC GGGCGGTGCG CTTACGTACA ACACGAACGT GCCCATTTCG TCAGCGTTCA ATCTGGTCGT CAATTCGGTG TCGCACGGGT TGTTCGCCGA TCTGTCGATC CTCGAAGCCA ACAATCTCGC CCGCGTGCTG GCACAGCCGA CGCTCGTCGC GTTGTCCGGC CAGAGCGCGA ATTTCCTGGC GGGTGGTGAA ATTCCGGTGC CGGTGCCGCA ATCGCTGGGC ACGATCTCGA TCGAATGGAA GCCTTACGGC GTGGGGCTGA CCGTCACGCC GACCGTGTTG AACCCGCGCC GGATCGCGCT GAAGGTCGCG CCCGAGTCGA GCCAGCTCGA CTTCGTGCAC TCGATCACGA TCAACGGTGT TCAGGTGCCC GCGCTGACGA CCCGGCGCGC GGATACGACG GTCGAGCTCG GCGATGGCGA AAGCTTCGTG ATCGGCGGTT TGATCGATCG CGAGACGACC TCGAACGTCA ACAAGGTGCC GTTCCTGGGC GATCTGCCCA TCATCGGCGC GTTTTTCAAG AATTTGAGCT ATCAGCAGAG CGACAAGGAA CTCGTGATCA TCGTAACGCC GCATCTCGTT GCGCCGATCG CGCAGGGCGC GTCGCTGCCG GCGACTCCGG GAGAACTGTC CGAGCAGCGC GACGGCCCCG TGTGGCGTTC CTATCTGGGC GGCATGGCGT CGCCGGATGC AGGGCCGGGG TTCTCGAAAT GA
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Protein sequence | MKKKLIGLAI ALSALAMPPL SGAADTSGTI SLAVGAQRQL ATGRALQRVA VGDPSVADVM VVKGGRGGVL LIAKSAGATN VMIWERGHDE PTVYNVSVTS GAARALLDGG TSSVNTYGGT TVIGGASGSL DGHQRAVHAA KTVSGKDGTT IDASTISGKN VVQVDVRVVE FSRSVLKQAG LNFFKQSNGF SFGAFAPTGL TSITGSPGGA LTYNTNVPIS SAFNLVVNSV SHGLFADLSI LEANNLARVL AQPTLVALSG QSANFLAGGE IPVPVPQSLG TISIEWKPYG VGLTVTPTVL NPRRIALKVA PESSQLDFVH SITINGVQVP ALTTRRADTT VELGDGESFV IGGLIDRETT SNVNKVPFLG DLPIIGAFFK NLSYQQSDKE LVIIVTPHLV APIAQGASLP ATPGELSEQR DGPVWRSYLG GMASPDAGPG FSK
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