| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4457 |
|---|
| Symbol | |
|---|
| ID | 3749657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 1416229 |
|---|
| End bp | 1417593 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637762747 |
|---|
| Product | multi anti extrusion protein MatE |
|---|
| Protein accession | YP_368697 |
|---|
| Protein GI | 78065928 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.13482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAT CCGCGTTACC GCACGGGGCC GGCTCGGCCG CCGTCACGCA TCGGCGTGTC
CTCGCGCTCG CGTTCCCGAT CGTCCTCGCA AACCTGACCC AGCCGATCCT CGGTGCCGTC
GACACGGCCG TCGCCGGTCA CCTCGACGGC GCGCAGTACC TCGGTGGCGT CGCGCTCGGC
GGGCTGTTCT TCAATTTCGT GTTCTGGGGG TTCGGTTTCC TGCGGATGGG GACGACCGGC
CTCGTCGCGC AAGCGCACGG TGCCGGCGAC GCTGCCGGAA TCCGCCTGAA CCTGCTGCGC
GCGTTGATCG TCGCGTTCGC ACTCGGCGCC GTGGTGCTGG CGCTGCAGGT GCCGCTGCTG
TCCTTTGCGC TGTCCGCGCT CGGCGGCAGC GATGCCGTCC GCACCACGGC GCTTGCCTAC
AGTCACGCGC GGATCTGGAG CGCACCGTTC GCGCTCGCGA ACTACGTCGT GCTCGGCTAC
CTGCTCGGCA TGCAGCGCGT GCGGCTCGCA CTCGTCGCGC AGGTGTTCAT CAATGCGGTG
AACATCGGCG CCGTGCTGCT CTACGTGTAT GGCTTCGGCT GGGGCATTGC CGGCATCGGC
GCCGCGACGG CCACCGCCGA CGCATGCGGT TTCGCGCTCG GCGCGTGGAT GCTGTGGCGA
CTGCGGCCGC GCGGCCTTGC GCCGATCGCG GTACGCGCGC TCGCCGATCG CGTCGCGCTC
AAGCGGCTGA TCGTACTCAA TCGCGACATC TTCCTGCGCA CGCTGTGCCT GCTCGGCGCA
TTCGGCTGGT TCGCGCACCT TGGTGCGAAA CAGGGCGATG CGACGCTCGC CGCAAACGCG
CTGCTGCTGA ATTTCCAGAC GTTCATGGCG TACGGTCTCG ACGGCTTCGC GCATGCGGCC
GAGGCGCTCG TCGGCGCGGC GGCCGGCGCG CGCGACCGCC GCGCGTTCCG GCAGGCCGTG
CGCGTCACGC TGTTCTGGTC GGCGCTCGGC GCGCTGCTGT TCGCGCTCGT GTACTGGGCC
GCCGGCGGCT GGATCATCGC GCGCCTGACC GACCAGGCCG AGATCCGCGA AGTGGCGCTG
CGTTACCTGC CGTGGGCCGC GATCTCGCCG ATCGTGTCGG TCTGGGGCTT CCTGCTCGAC
GGCGTCTTCA TCGGCGCCAC GCAGACGCAA TCGCTGATGC GTGCGATGGT CGCATCGTTC
TCGATCTTCG TCGTGGCCAC GCTCGCCGCC GTCGGCACAT TCGGCAATCA CGGCCTCTGG
TTCGCGCTGC TGCTGTTCAT GGCCGCACGC GGCGCGACGC TGGCGCGCTA CCTGCCGGCG
CTGTTGCGGC ACATCGGCAC CGACACGCCC GCGGCCCGCG CCTGA
|
|---|
| Protein sequence | MSESALPHGA GSAAVTHRRV LALAFPIVLA NLTQPILGAV DTAVAGHLDG AQYLGGVALG
GLFFNFVFWG FGFLRMGTTG LVAQAHGAGD AAGIRLNLLR ALIVAFALGA VVLALQVPLL
SFALSALGGS DAVRTTALAY SHARIWSAPF ALANYVVLGY LLGMQRVRLA LVAQVFINAV
NIGAVLLYVY GFGWGIAGIG AATATADACG FALGAWMLWR LRPRGLAPIA VRALADRVAL
KRLIVLNRDI FLRTLCLLGA FGWFAHLGAK QGDATLAANA LLLNFQTFMA YGLDGFAHAA
EALVGAAAGA RDRRAFRQAV RVTLFWSALG ALLFALVYWA AGGWIIARLT DQAEIREVAL
RYLPWAAISP IVSVWGFLLD GVFIGATQTQ SLMRAMVASF SIFVVATLAA VGTFGNHGLW
FALLLFMAAR GATLARYLPA LLRHIGTDTP AARA
|
|---|
| |