Gene Bcep18194_A4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A4421 
Symbol 
ID3749620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp1378406 
End bp1379587 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content73% 
IMG OID637762710 
Productpolyhydroxyalkanoate depolymerase 
Protein accessionYP_368661 
Protein GI78065892 
COG category[I] Lipid transport and metabolism 
COG ID[COG4553] Poly-beta-hydroxyalkanoate depolymerase 
TIGRFAM ID[TIGR01849] polyhydroxyalkanoate depolymerase, intracellular 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.199282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCT GGCGCGCGGC GACGCGGCAC GCGTTCGACG CGTGGCCCGC GGCCACGCTG 
CCGCACGCCG CGTCGTCGTG CTATGACGAC CTGTTCGAGC CGCTGCTCGG GCCGCCGGAC
GGCCCCCCGC GCTTCGATAT CGGATGGCCG GCGCTCGGCG AGCGCGTGGT CGCGCGCACG
CCGTTCTGCG ACCTGCGGCG TTTCACGCGC GCCGATGCGC GGCGCACGGT GCTGCTGTGC
GCGCCGCTCG CCGGGCATGC GGCCGTGATG ATGCGGGAAA CCGTCGAGAC GCTGCTCGCG
GACGGCGACG TCTGCGTGAC CGACTGGCGC AACGCGCGCG ACGTGCCGCT CGCATCGGGC
CGCTTCGGGC TCGACGAGTA TGTCGCGACG CTCGACGGCT TCGTCGACGG GCTCGCGCCC
GACGACCGGC CGCTGCATGT CGTCGCCGTG TGCCAGGCGA CCGTGCCGGT GCTTGGCGCG
CTCGCGCTAC GCGCGGCGCG CGGCCTCCCA CCGCCCGCGA GCGTCACGCT GATCGGCGGC
CCGCTTGACG CGCGCCGCAA TCCGAGCGCA CTCGGCACCG CCGCTGCCGC CCATTCGCTC
GGCTGGTGCC GCCGCCACCT GATCGACGTC GTGCCGCCCG GCTTCGCGGG GCACGGCCGC
CACGTGTTTC CGACCTATCT GCAGCAGGGC GAGATCGCGC TCGTGTACCC GCAGCGCTTC
CTGTCGCTGA TCGAGGCGTA CGCGCTGGCC GCGTCGCGCT TCGACATGAC CGGGCTCGCC
GGCGCGCGGC GTGCGCTGCT CGAATACACG GCGCTGCTCG ACATGCCGGC CGAATATTTC
CTCGATACGG TCGACATCGT GTTCCAGCGC ATGAGCCTTG CGCTCGGCAC GTGGGACGTG
GGCGGCCAGC GCGTCGAGCC GGCGGCGTTG CGCGACGTCG CGCTGCTGAC CGTCGAAGGC
GCATGCGACA AGGTCACGGG CGCCGGCCAG ACGCACGCGG CACTCGACCT GTGCAGCGGC
CTCGCCGACG ACGAGCGCTA CCGCATCGAC ATCGACGACT GCGATCACTA CGGGCTGTTT
ACCGGGGCGC GCTGGCACGG GGATGTCCAT CCGATGCTGC AGCGCGTGTT CGCGTGGGCC
GAAACCCGCC GCCCTCGCCC GCACCGCACC AGGCGGACGT GA
 
Protein sequence
MRAWRAATRH AFDAWPAATL PHAASSCYDD LFEPLLGPPD GPPRFDIGWP ALGERVVART 
PFCDLRRFTR ADARRTVLLC APLAGHAAVM MRETVETLLA DGDVCVTDWR NARDVPLASG
RFGLDEYVAT LDGFVDGLAP DDRPLHVVAV CQATVPVLGA LALRAARGLP PPASVTLIGG
PLDARRNPSA LGTAAAAHSL GWCRRHLIDV VPPGFAGHGR HVFPTYLQQG EIALVYPQRF
LSLIEAYALA ASRFDMTGLA GARRALLEYT ALLDMPAEYF LDTVDIVFQR MSLALGTWDV
GGQRVEPAAL RDVALLTVEG ACDKVTGAGQ THAALDLCSG LADDERYRID IDDCDHYGLF
TGARWHGDVH PMLQRVFAWA ETRRPRPHRT RRT