| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4376 |
|---|
| Symbol | |
|---|
| ID | 3749575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 1331983 |
|---|
| End bp | 1334916 |
|---|
| Gene Length | 2934 bp |
|---|
| Protein Length | 977 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637762665 |
|---|
| Product | haemagglutinin and invasin like cell surface protein |
|---|
| Protein accession | YP_368616 |
|---|
| Protein GI | 78065847 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA CTTTCCGTAC GATCTGGAAC GACGCACTGG GCGCCTGGGT CGCCGCCTCC
GAAACCACCC GCGCCAACGG CAAGAAGACC TCGAGCAAGG TGTCGGCGTC CGCTCGGGTG
GCCGCCACCC TCTCCGTCGT CGCCGCCGCC GTCGCACCGC TCGACGCCGC GGCGCAAGCG
GCGCAACCCG GCACGACGTC CTACTACAGC GTGAACGACG GCGGCACCGC CGGCGCGAAC
GTCAACAACG ACGGCGCAAC GGGCCTGAAC GCACTCGCAG CCGGCGTCAA CGCGGCGGCA
GCGGGCGATG CCGACATTGC GATCGGTTCG GGTGCGACCA GCAGCAGCGG CTCGACGGGC
GCCGGCAACA TCGCGATCGG CCAGGATGCG CAGGCCCTGA CGCCTGGCGG CGGCTATGGC
GCAACCGCGC TCGGCGCGGG CGCGAAGGCC GGCACCGGCG GCTATACCGG TGCCACTGCA
GTCGGCTACA ACAGCACGGC CACCGAAAAC AGCACGGCAA TCGGCGCGAG CGCGATCTCG
AGCCAGACCG GCACGGCGCT CGGCCGCGCC GCGGAAGCGA CCGGGCGCGG CGCGCTCGGC
GCCGGATCGT CCGCCGCCGC GACCGCGACG AGCGCGATCG CACTGGGCGA CCGGGCGACG
AGTTCGGCCA ACACCAGCGT GTCGGTCGGC GCGCAGGCCA CCGCCAGCGC GCAGGCCGCG
AGTGCGATCG GGCCGCGTGC CGTCGCATCG GGCGCCGGCG CGGTCGCGCT CGGCGCGAGC
GCAACGGCCG CCCACGCGGG TTCGGTCGCG CTGGGCTCCG GCGCCGTGAC TGACGCAGCC
GTCGGTACGA GCGGTGCGAC GATCAACGGC ACCGCCTACG ACTTCGCCGG CATTGCGCCC
GCCTCGACCG TCAGCGTCGG CGCGGCAGGT CGTGAACGCA CGATCACCAA CGTCGCGGCC
GGCCGACTTG CGGAAAAAAG CACCGATGCC GTCAACGGCT CCCAGTTGAA CGCAACCAAC
CAGGCAGTCG CGGCGGTCGG CTCCAGCGTC ACGAGCCTGT CGACGTCGAC ATCGACGGGC
CTCTCCACCA CAAACGACAC GCTCGTGTCG TTGTCGACGT CGACCGCCGA CAGCCTGCGC
GTCGTCGACA GCAACATGGC GTCGCTATCG ACCGGCCTGA GCACGACCGA CAACACCGTC
GCGTCGCTGT CGACCGCGAC GTCGGCCGGT TTGTCGACGA CCAACAACAC ACTGGTTTCG
CTATCCACGT CCGCATCGAC CGGCATCGAC ACGCTCGGCC AGAACCTGAC GTCGTTGTCG
ACCGCAACAT CGACCACCGC CGGTTCCTTG TCCACCACGA TCAGTACAAC GAATGACAAT
CTCGTCTCGC TGTCGACCTC GACGTCGACC GGATTCGTGT CGCTGTCGAC CGGCCTGAGC
ACGACCAACG ACACTGTCAC GTCGTTGTCG ACCTCCACGT CGACGGGGCT GTCGACGACG
AACAGCACGC TCGCGTCGTT GTCGACGTCC GCATCGACGG GCATCAACTC GCTGTCGACC
AGCCTCAGCG CGACGGACAG CGCGATGACG TCGCTGTCCA CGTCGACGTC GTCGGGCCTC
GGCTCGCTGT CGACCAGCAT CAGCTCGGTC ACCGTCAACA CGACGAACCT CGGCACCAGC
ACCGCCGATG CGCTCGGCGG CGGCGCGACG TACGATCCGG CGACCGGCAA GATCACCGCG
CCATCGTACG TGACGTACAA CAACGACGGC ACGACGACGA CCAACGGCAA CGTGGGCGAC
GCCATCGACA ACCTCAATGC GAAGGGCGCG AAGTACTTCC ACGCGAACTC GACCGAAGCC
GACAGTCAGG CCACCGGCGC GAACAGCGTC GCAATCGGCC CGAACGCGAT CGCCAATATC
GACAACTCGG TGGCGATCGG CCATCGCTCG GTCACCGGTG CCGCCGTCGG CGTATCGTCG
TCGACCATCG GCGACCTGCA TTTCGGCGGC TATGCGGGCG CCAACCCGTT CGGCGTGTTC
AGCGTCGGCG CACCCGGCCA GGAACGCCAG ATCCAGAACG TCGCGGCCGG CCGCGTGAGC
GCCGACAGCA CCGACGCAAT CAACGGCAGC CAGCTGCACG CGACCAACCT GAACGTCGCA
TCGCTGTCGA CCGGGCTCAG CTCGACGAAC AGCAACCTCG CATCGCTGTC CACGTCGACG
TCGACGAGCA TCGGCTCGCT GTCGACCGGC CTGTCATCGA CCAACGAAGC GCTGGGCTCG
CTGTCGACTT CCACGTCGAC GAGCGTGACG TCGCTGTCCA CCGGCCTGTC GACGACCAAC
GACCGCGTGT CGTCGCTGTC GACCAGCGTG ACCAACATCA ACACGCAGAT CAACAACCTG
TCGACGTCGG CATCGCGCAA CACCGGCATC ACCGCGGACA TGAACGGCTC GGGCACCGAT
GCGCCGACCG TCACGGCCGG CTCCAACTCG GTCGCGATCG GCGCGAAATC GGACGACGGC
GGCCGCTCGA ACGTGGTGTC GGTCGGCAGT GCGGAGCAGC AGCGCCAGAT CGTCAACGTC
GCACCGGGCA CGCAGGGCAC CGACGCGGTC AACGTGAATC AGCTCACGCT GGCGACCGAA
TCGGCGAACC GCTACACCGA CCAGCGGGTC GGCGCGATTC AGCAAGGCGT GAACGACCTC
GCGCGCAATG CATATTCGGG CATCGCGATC GCCGGCGCAC TCGCGGGCAT GCCTCAGGTC
GATCCGGGCA AGGTGATCTC GGTCGGCGCC GGGTTCGGCA ACTACGGCGG CTACACGGCG
ATCGCGGTCG GCGGCAGCGC GCGGATCGCG CAGAACACCG TGATCAAGCT GGGGGTCGGC
ACGGTCAACG GCTCGCGCAT GATGGTCAAC GGCGGCATCG GCCATTCGTG GTGA
|
|---|
| Protein sequence | MNRTFRTIWN DALGAWVAAS ETTRANGKKT SSKVSASARV AATLSVVAAA VAPLDAAAQA
AQPGTTSYYS VNDGGTAGAN VNNDGATGLN ALAAGVNAAA AGDADIAIGS GATSSSGSTG
AGNIAIGQDA QALTPGGGYG ATALGAGAKA GTGGYTGATA VGYNSTATEN STAIGASAIS
SQTGTALGRA AEATGRGALG AGSSAAATAT SAIALGDRAT SSANTSVSVG AQATASAQAA
SAIGPRAVAS GAGAVALGAS ATAAHAGSVA LGSGAVTDAA VGTSGATING TAYDFAGIAP
ASTVSVGAAG RERTITNVAA GRLAEKSTDA VNGSQLNATN QAVAAVGSSV TSLSTSTSTG
LSTTNDTLVS LSTSTADSLR VVDSNMASLS TGLSTTDNTV ASLSTATSAG LSTTNNTLVS
LSTSASTGID TLGQNLTSLS TATSTTAGSL STTISTTNDN LVSLSTSTST GFVSLSTGLS
TTNDTVTSLS TSTSTGLSTT NSTLASLSTS ASTGINSLST SLSATDSAMT SLSTSTSSGL
GSLSTSISSV TVNTTNLGTS TADALGGGAT YDPATGKITA PSYVTYNNDG TTTTNGNVGD
AIDNLNAKGA KYFHANSTEA DSQATGANSV AIGPNAIANI DNSVAIGHRS VTGAAVGVSS
STIGDLHFGG YAGANPFGVF SVGAPGQERQ IQNVAAGRVS ADSTDAINGS QLHATNLNVA
SLSTGLSSTN SNLASLSTST STSIGSLSTG LSSTNEALGS LSTSTSTSVT SLSTGLSTTN
DRVSSLSTSV TNINTQINNL STSASRNTGI TADMNGSGTD APTVTAGSNS VAIGAKSDDG
GRSNVVSVGS AEQQRQIVNV APGTQGTDAV NVNQLTLATE SANRYTDQRV GAIQQGVNDL
ARNAYSGIAI AGALAGMPQV DPGKVISVGA GFGNYGGYTA IAVGGSARIA QNTVIKLGVG
TVNGSRMMVN GGIGHSW
|
|---|
| |