| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4320 |
|---|
| Symbol | |
|---|
| ID | 3749519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 1265455 |
|---|
| End bp | 1266822 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637762609 |
|---|
| Product | amino acid transporter |
|---|
| Protein accession | YP_368560 |
|---|
| Protein GI | 78065791 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.619853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.387948 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT TGCAGCGCCA CCTGAGTGCG CGGCACATCC GCTTTCTCGC GCTGGGTTCG
GCGATCGGCA CGGGCCTGTT CTACGGTTCG GCGTCCGCGA TCCAGCTCGC GGGCCCGGCC
GTGATCCTGG CGTACATCCT CGGCGGCGCG GCCGTCTACA TGGTGATGCG CGCGCTCGGC
GAGATGGCCG TGCGCGACCC GGTCGCCGGC TCGTTCGGCC ACTACGCGAC CGAGAACCTC
GGCCCGTTCG CCGGGTTCGT CACCGGCTGG ACCTACACGC TCGAAATGGT GATCGTCGCG
ATCGCCGACA TCACCGCGTT CGGCATCTAC ATGGGCTTCT GGTTTCCGGA TGTCCCGCAA
TGGATCTGGG TGCTCGGCGT CGTCGCGATC ATCTGCGGGC TGAACCTGTG CCATGTGAAG
GTGTTCGGCG AGCTCGAATT CTGGCTGTCG ATCATCAAGG TCGGCGCGAT CGTCGCGATG
ATCGGCGGCG GCGTCGCGAT CCTGCTGACC GGCATGCACT TCGGCCACTC GGCCGACGTG
CCGACGTTCG CGAACCTGTG GAACCACGGC GGCTTCCTGC CGAACGGCGT CGGCGGGCTG
ATCGCGTCGC TGTCGGTCGT GATCTTCGCG TACGGCGGGA TCGAGGTGAT CGGCATGAGC
GCCGGCGAGG CGAAGGATCC GGAACGCGTG ATTCCGCGCG CGATCAACGC GGTGCCCGCA
CGCATCCTGC TGTTCTACGT GCTGACGATG GTCGTATTGA TGTCGATCAG CCCGTGGACG
GGTGTCGGCA ACGAAGGCAG CCCGTTCGTG CAGATCTTCT CGGCGCTCGG CGTGAAGTCG
GCCGCGACGA TCCTCAACCT GGTGGTGATC AGCGCGGCGA TCTCCGCGAT CAACAGCGAC
ATCTTCGGCG CGGGCCGGAT GATGTTCGGG ATGGCGCGCC AGGGCCAGGC GCCGCGCGTG
CTGATGACGA CGTCGCGGCA CGGTGTGCCG TGGGTCACGG TGGTCGTGAT GGCAGCCGCG
CTGCTCGTCG GCGTGCTGCT CAACTACCTG ATGCCGAAGG ACGTGTTCCT GATGGTCGCG
GCGATCGCGA CGTTCGCCAC CGTGTGGGTG TGGCTGATGA TCCTGCTGTC GCAGGTCGCG
ATGCGCCGCC GGCTGTCGAG CACCGAAGTC GCGGCGCTGA AGTTCAAGGT GCCGTTGTGG
CCGGTCGCGC CGGCACTGAC GATCGCGTTC ATGGGCTTCG TGATCGTGAT GCTCGGCTGG
TTCGAGGACA CGCGCGTCGC GCTGTATGTC GGCGCGGCCT GGCTCGCGCT GCTCGCGCTC
GTGTTCTACG CACGGATCCG CCCGAAATTC GCACCTGCGT CACGTTGA
|
|---|
| Protein sequence | MKNLQRHLSA RHIRFLALGS AIGTGLFYGS ASAIQLAGPA VILAYILGGA AVYMVMRALG
EMAVRDPVAG SFGHYATENL GPFAGFVTGW TYTLEMVIVA IADITAFGIY MGFWFPDVPQ
WIWVLGVVAI ICGLNLCHVK VFGELEFWLS IIKVGAIVAM IGGGVAILLT GMHFGHSADV
PTFANLWNHG GFLPNGVGGL IASLSVVIFA YGGIEVIGMS AGEAKDPERV IPRAINAVPA
RILLFYVLTM VVLMSISPWT GVGNEGSPFV QIFSALGVKS AATILNLVVI SAAISAINSD
IFGAGRMMFG MARQGQAPRV LMTTSRHGVP WVTVVVMAAA LLVGVLLNYL MPKDVFLMVA
AIATFATVWV WLMILLSQVA MRRRLSSTEV AALKFKVPLW PVAPALTIAF MGFVIVMLGW
FEDTRVALYV GAAWLALLAL VFYARIRPKF APASR
|
|---|
| |