| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4306 |
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| Symbol | |
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| ID | 3749505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | - |
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| Start bp | 1251667 |
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| End bp | 1253037 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637762596 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_368547 |
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| Protein GI | 78065778 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0237047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.270235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACG AACAAAAGCC CACGCCTCCT TCGAAAGACC CCGCGTCTCC CGCCGCGCGG
CGCCCGCGCC GCACGCTGAT GGCCGGCGCG CTCGCGGTCG TCGTCATCGG CGGCCTGCTG
TGGTGGCATC CGTGGAACCG CACGCCGGCA ACCGGCACTG CGGCGAGCGG CGCGGGCGCA
AGCGCGGCCG GCGGTACCGG CGGCCACCGC GGCCGTGGCG GCCCCGCCGC GATGGCGAAC
ATTCCGCAGC CCGTTCAGGT CGCGACCGCG ACGCAGGGCG AAATGCCGAT CGTGCTGTCC
GCGCTCGGCA CCGTCACGCC GCTCGCGAAC GTAACGGTCA AGACGCAGTT GTCCGGCTAC
CTGCAGTCGG TAGCGTTCCA GGAAGGCCAG ATCGTCAAGA AGGGCGACGT GCTCGCGCAG
ATCGACCCGC GCCCGTACCA GGTGTCGCTC GAGAATGCCG AAGGCACGCA CGCGCGCGAC
TCGGCACTGC TCACAACGGC CCGCCTCGAC CTGAAGCGCT ACCAGACGCT GCTGTCGCAG
GATTCGATCG CGTCGCAGAC CGTCGATACC CAAGCGTCGC TCGTCAAGCA ATACGAAGGC
GCGGTGAAGA CCGACCAGGC CGCGATCGAT TCCGCGAAGC TGAACCTCAC GTATGCGCGC
ATCACCGCGC CGGTGTCGGG CCGCGTCGGC CTGCGCCAGG TCGACCCCGG CAACTACGTG
ACGCCGGGCG ATACCAACGG CCTCGTCGTG ATCACGCAGC TGCAGCCGAT GAGCGTGATC
TTCACGACGT CGGAAGACAA CCTGCCGCAG ATCCTCAAGC AGGTGAACGC AGGCCAGAAA
CTGTCGGTCA CCGCATACAA CCGCAACAAC ACGGTGCCGC TCGAAACCGG CTCGCTCGCG
ACGCTCGACA ACCAGATCGA CACGAGCACG GGTACGGTCA AGCTGCGTGC AAACTTCGAT
AACAAGGAAG GCATGCTGTT CCCGAATCAG TTCGTGAACA CGCGCCTGCT CGTCGACGTA
CTGCGCAACG CGACGATCGT GCCGACGGCG GCCGTGCTGA CCGGCTCGAT CGGCCAGTTC
GTCTATGTCG TGAAACCCGA CAACACGGTG ACGGTGCGCA AGGTCACGAT CGGCCCGGTC
GACGGCGAAC GCACGAGCAT CGTCAGCGGC GTGTCGCTCG GCGAGCGCGT GGTGACCGAC
GGCTCCGACC GCTTGCGCGA AGGCGCGAAG ATCTCGATCC CGGCCGACAA GCCGAAAGGC
GCGTCGGGCG CGCACGGCGC CGCTGCGGCG TCGGGGGCAT CGGGTGCCGG CGGCCATCGC
GGCGGACACA AGCACGGCGC GTCGCAGGCA GCGGCCTCCG CGGCCCAGTA A
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| Protein sequence | MDNEQKPTPP SKDPASPAAR RPRRTLMAGA LAVVVIGGLL WWHPWNRTPA TGTAASGAGA
SAAGGTGGHR GRGGPAAMAN IPQPVQVATA TQGEMPIVLS ALGTVTPLAN VTVKTQLSGY
LQSVAFQEGQ IVKKGDVLAQ IDPRPYQVSL ENAEGTHARD SALLTTARLD LKRYQTLLSQ
DSIASQTVDT QASLVKQYEG AVKTDQAAID SAKLNLTYAR ITAPVSGRVG LRQVDPGNYV
TPGDTNGLVV ITQLQPMSVI FTTSEDNLPQ ILKQVNAGQK LSVTAYNRNN TVPLETGSLA
TLDNQIDTST GTVKLRANFD NKEGMLFPNQ FVNTRLLVDV LRNATIVPTA AVLTGSIGQF
VYVVKPDNTV TVRKVTIGPV DGERTSIVSG VSLGERVVTD GSDRLREGAK ISIPADKPKG
ASGAHGAAAA SGASGAGGHR GGHKHGASQA AASAAQ
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