| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4299 |
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| Symbol | |
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| ID | 3749498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | - |
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| Start bp | 1239567 |
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| End bp | 1241402 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637762589 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_368540 |
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| Protein GI | 219380070 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0994199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCCA ACAGGAAACA GACGTCACGC AAGGGCTCCT GGCGCAGCGC CTTGCATACG
CTGCGCCGCT TCGCCTGGTC GGGCGGCGCG CTGATGCCCG CGCGCGCCGG CGCGCCGCGA
CGCGACGACT CCGTGCGCAA CTGGCTGGAA CAGACGGTCG GCACGGTGGA TTTCCTCGCC
CATGTCGACC GCGAACTGCG CTTTCTGTAC GTGTCCGACG CGAGCCTGCG CTTCATCGGC
TACCACCGCG ACTACCTGCA CACGCTGACG CTGCGCGACC TGATCGCCGA ACAGGATACC
GCGGCACTCG AAGGCCTGCT TGCACGCGCC GCGCGTTCCG GCCAGGTCGA GAAGGCGACG
ATGTGCATCG TCAAGTCGCT CACCTACCCG CTGGACGTCG AGATCCGCGC GTTCAAGAGC
CGCCACCACG GGGTCGACGG GTTCGCGATC GCGGCGTTCG ACGTGTCGTC ATGGCGCGCG
CTCGAGGCAC GCCTGACGTA CGAAATGCAT CACGACCCGA TGACGGGGCT CGGCAACCTG
TCCGCGCTCG TGCCCGCGCT GATGCGCGCG CAGCAGGCCG CCGACGGGGA AGGCACCTGC
GCGGCGCTGC TGCTGCTCGA CCTCGACGAC TACCAGCGGA TCAACCGCGC GCTCGGCTAC
GACGCGGGCG ACACGCTGCT GCGCGAGACC GCGCAGCGGC TGAAGGCGCT CGTCACGCCG
AACGAGCAGC TCGCGCGCGT CGCGAGCGAC AAGTTCGCGG TCGTGCTCGG CGCACCGGAC
CGCACGCAGG CCAGCAATGC GGCGGACGCA CTCGCGCGCC GGCTGCAGGC CGCGGTGCGC
GAGCCCTACG TGTACCAGGG GCAGACCGTG CACCTGTCCG CGAGCATCGG CATCGCGCTC
TATCCGGACG AACGTGCACT GCCCCATCGC GCACAGCACC ACAGCCCGCT GCTGCGCCGC
GCCGACCACG CGCTCTCGCA GGCGAAGGCG TCGGGCGGCA ATGCGCTCGC GTTCCACGCG
CCCGTCGACG ATCCGGCCGA CGCCGAACGG CTGAAGCTCG AGGCCGACCT GTACGACGGC
GTGCGCAACG GCGAGTTTTC GCTCCATTTC CAGCCGATCA CGCGCAGCCA GTCGGGCGCG
GTGGTCGGTG TCGAGGCCCT GATCCGCTGG CGCCATCCGG TGCACGGCCT CGTGCCGCCG
GCGACGTTCA TTCCGCTCGC CGAATCGATC GGCCTGATCA ACTATCTCGG CAACTGGGTG
CTCAAGGCCG CGTGCATGCA GCTCGTCGCC TGGGACCGCC AGGGGCTTGC GCTGCAGTAC
GTGGCGGTCA ACGTGTCGCC GCAGCAGTTC CGCGACCCGC GCTTCACGCA GAGCGTGCGC
GAGGCGATCA CGCTGACGGG CATCGACCCG CGCCGCATCG TGCTCGAGAT CACCGAAAGC
CTGCTGATGC ACGATCCGGC GCAGGCGAAG GGGCTGCTCG AGGAACTGAC CGATCTCGGC
ATCCGCTTCG CGATCGACGA TTTCGGCACC GGCTATTCGA GCCTCGCGTA TCTGCAGCGC
TTCCCGCTCG CGAAGCTGAA GATCGACCGC AGTTTCGTCG AGAACCTGCT GACCTCGCGC
AACGACCGCG CGATCGTGTC GGCGGTGGTC GGCCTCGCGC AGACGCTCGA TCTCGAGCTC
GTCGCGGAAG GCGTCGAGAC CGAGGCGCAG CGCGAATTGC TGACCGAGAT GGGCTGCAAC
CATATCCAGG GCTGGCTCGT CTGCCAGGCG CTGCCGTCCG AGGAGCTCGC GCGGCGCTTC
GAGGCGCAGC AACTGCACCT GCACGCCGCC GCCTGA
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| Protein sequence | MEANRKQTSR KGSWRSALHT LRRFAWSGGA LMPARAGAPR RDDSVRNWLE QTVGTVDFLA
HVDRELRFLY VSDASLRFIG YHRDYLHTLT LRDLIAEQDT AALEGLLARA ARSGQVEKAT
MCIVKSLTYP LDVEIRAFKS RHHGVDGFAI AAFDVSSWRA LEARLTYEMH HDPMTGLGNL
SALVPALMRA QQAADGEGTC AALLLLDLDD YQRINRALGY DAGDTLLRET AQRLKALVTP
NEQLARVASD KFAVVLGAPD RTQASNAADA LARRLQAAVR EPYVYQGQTV HLSASIGIAL
YPDERALPHR AQHHSPLLRR ADHALSQAKA SGGNALAFHA PVDDPADAER LKLEADLYDG
VRNGEFSLHF QPITRSQSGA VVGVEALIRW RHPVHGLVPP ATFIPLAESI GLINYLGNWV
LKAACMQLVA WDRQGLALQY VAVNVSPQQF RDPRFTQSVR EAITLTGIDP RRIVLEITES
LLMHDPAQAK GLLEELTDLG IRFAIDDFGT GYSSLAYLQR FPLAKLKIDR SFVENLLTSR
NDRAIVSAVV GLAQTLDLEL VAEGVETEAQ RELLTEMGCN HIQGWLVCQA LPSEELARRF
EAQQLHLHAA A
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