| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4271 |
|---|
| Symbol | |
|---|
| ID | 3749470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 1203957 |
|---|
| End bp | 1205870 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637762561 |
|---|
| Product | ABC efflux pump, fused ATPase and inner membrane subunits |
|---|
| Protein accession | YP_368512 |
|---|
| Protein GI | 78065743 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.611516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATT ATTCAGTCCG GGCGAACGCC GGCCTGCGAT CCAGCCGCCA CGCTCAATCA
CCGAATCACC GCACGCATAT TTTGGAATCT CTCACCCCTG CCCAGCGCAA CGCCCACAAC
GCGAAGCTGT CGAGCTACGC GCATCGACCG ATCGCGTTCC TGTTCCGCTA CATTCGCCTG
CATCCTGTCG CCCACCTGAT CGTGCTCTGC AGCGTGCTGG CCGCCGTCGG CTGCGCGCTC
GGCTCGCAAT ACGCGATCAA GCACCTGATC GACGTGCTGG CGACCGGGCG GCATCACCCC
GGCCCGCTGT GGAGCGCATT CGCGCTGCTC GTCGGGCTGA TCGCCGCCGA CAACCTGCTG
TGGCGCGTCG GCGGCTGGTT CGCCGCGCAC ACGTTCGTCG CCGTCACCGG CGACCTGCGG
CGCGACCTGT TCCAGTACCT GATCGGCCAT TCGCCCACCT ACTACGCCGA GAAGCAGCCC
GGCACGCTCG CGAGCCGCAT CACGGCCACG TCGAACGCGG TCTACACGTC TGAAAACACG
ATGGCGTGGA ACGTACTGCC GCCGTGCATC GCGGTGATGG GCGCGATCCT GATGATCATC
GTCGTCAATC CGATGATGGC GGCGGGCCTG CTCGGCTGCT CCGCGGTGCT CTCCATCGTG
CTGTTCAAGC TGGCCGGTCG CGGCTCGGCA CGCCACCACG CATTCGCGGC GAAGGCCGCC
GCGGTCGACG GCGAACTCGT CGACGTGATC GGTAACATGG GCCTCGTGCG TGCGTTCGGG
ATGACGCTGC GCGAACAGAA ACGCTTCGGC GCGACGGTCA AGGCCGAGAT GGACGCGCGC
CAGCAAAGCC TGCTCTATCT CGAGAAGCTG CGCCTGCTGC ACGCGGTGAT CACCGCGATG
CTGTCCGCCG GCCTGCTCGG CTGGGCGCTG TGGCTGTGGG ACCAGGGCCG CGCGACGTCG
GGCGACATCG TGCTCGTCAG CTCGCTCGGC TTCACGATCC TGCACGGCAC GCGCGATCTC
GCGGTCGCGC TCGTCGACGT CACGCAGCAC ATCGCGCGCC TGTCCGAAGC GGTCAAGACG
CTGCTCGAGC CGCACGGGAT GCCGGACCGC TCCGACGCGC AGCCGCTGTC GGCCAAGGGC
GGCCGCGTCA ACTTCGAGCG CGTGACGTTC GCGTATCCGC ACCGCCGCGC GATCCTCGAC
CACTTCGACC TCCATATCGA GCCGGGCCAG CGCGTCGGCC TGATCGGCAA GTCGGGCGCC
GGCAAGTCGA CCGTGCTCGC GCTGCTGCAG CGCTTCTACG ATACGCAGGA CGGCGCCGTG
CAGGTCGACG GCCAGGACGT GAAGACGATC ACGCAGGACA GCCTGCGCCA CGCGATCGCA
CTCGTGCCGC AGGACATCTC GCTGCTGCAC CGGACGATCT ACGACAACAT CGCGTACGGC
CGCCCCGAAG CGACCCGCGA GGAAGTGCTC GCCGCCGCGC GCGACGCGCG CTGCGCGGAG
TTCATCGAAG CGATGCCGGA AGGCTATGAC ACGATCGTCG GCGACCGCGG CGTCAAGCTG
TCGGGCGGCC AGCGCCAGCG CATCGCGATC GCGCGCGCGA TCCTGAAGGA TGCGCCGATC
CTGCTGCTCG ACGAAGCGAC GTCCGCGCTC GACAGCGCAT CCGAGGAAGC GATCCAGAGC
GCGCTCGACC GCCTGATGGT CGGCCGCACG GTGATCGCGA TCGCCCACCG CCTGTCGACG
CTGCGCAACT TCGACCGGAT CATCGTGATG AACAACGGCA AGGTCATCGA CGACGGCGCG
CCCGACGTGC TGCGCAACCG CCCGGGCCTG TACCGCGACC TGCTCGCGAA ACAGCATGGC
CGCCATCACC CGGCCCCCGA CGGCAGCACG CCGACCGGCG AACGCGCGGC CTGA
|
|---|
| Protein sequence | MPDYSVRANA GLRSSRHAQS PNHRTHILES LTPAQRNAHN AKLSSYAHRP IAFLFRYIRL
HPVAHLIVLC SVLAAVGCAL GSQYAIKHLI DVLATGRHHP GPLWSAFALL VGLIAADNLL
WRVGGWFAAH TFVAVTGDLR RDLFQYLIGH SPTYYAEKQP GTLASRITAT SNAVYTSENT
MAWNVLPPCI AVMGAILMII VVNPMMAAGL LGCSAVLSIV LFKLAGRGSA RHHAFAAKAA
AVDGELVDVI GNMGLVRAFG MTLREQKRFG ATVKAEMDAR QQSLLYLEKL RLLHAVITAM
LSAGLLGWAL WLWDQGRATS GDIVLVSSLG FTILHGTRDL AVALVDVTQH IARLSEAVKT
LLEPHGMPDR SDAQPLSAKG GRVNFERVTF AYPHRRAILD HFDLHIEPGQ RVGLIGKSGA
GKSTVLALLQ RFYDTQDGAV QVDGQDVKTI TQDSLRHAIA LVPQDISLLH RTIYDNIAYG
RPEATREEVL AAARDARCAE FIEAMPEGYD TIVGDRGVKL SGGQRQRIAI ARAILKDAPI
LLLDEATSAL DSASEEAIQS ALDRLMVGRT VIAIAHRLST LRNFDRIIVM NNGKVIDDGA
PDVLRNRPGL YRDLLAKQHG RHHPAPDGST PTGERAA
|
|---|
| |