Gene Bcep18194_A4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A4071 
Symbol 
ID3749257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp998157 
End bp999404 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content65% 
IMG OID637762349 
ProductABC sugar transporter, periplasmic ligand binding protein 
Protein accessionYP_368312 
Protein GI78065543 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00185695 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC GCTCGATCAT GGGTGCGCTC TGCGCGGCAG GTCTGATGGC TGGCGCCGTG 
GCGGCGCAGG CAGCCGAGAA TGTAACGGTG CTGCACTGGT GGACCTCGGG CGGCGAGTCG
AAGGCCGTCG GCGTGCTGAA GGACGACCTG CAGAAGCAGG GCTACGTGTG GAAGGACTTC
GCGGTCGCGG GCGGCGCCGG CGCCGCGGCA ATGACCGCGC TGAAGACCAA GGTGATCAGC
GGCGACTCAC CGTCGGCCGC GCAGATCAAG GGCCCGCTGA TCCAGGACTG GGCCGACCAG
GGCGTGCTCG TCAACATCGA CTCCGCTGCC GGCGACTGGA AGCAGAACCT GCCGCCGGAA
ATCGACAAGA TCATCAAGTA CAAGGGCCAC ACCGTCGCGG CGCCGTTCTC GGTGCACCGC
GTGAACTGGC TGTACATCAA CAAGGCCGCG CTCGACAAGG TCGGCGCGAA GGTGCCGACC
ACCTGGCCTG AATTCTTCGC GGTGGCCGAC AAGCTGAAGG CCGCGGGCAT CCAGCCGGTC
GCGATGGGCG GCCAGCCGTG GCAGGACCTG ACGCTGTGGG AAGACGTCGT GCTGTCGCAG
GGCCCGGCGT TCTACAAGAA GGCGCTGGTC GACCTCGACC AGGCGACGCT GACCTCGCCG
CAGATGCTGT CCGTGTTCGA CACGGTGCGC AAGATCCAGG GCTACTTCGA TGCCGGCCGT
AACGGCCGCG ACTGGAACCT CGCGACCGCG ATGGTGATCA ACGGCAAGGC CGGCATGCAG
TTCATGGGCG ACTGGGCGAA GGGCGAGTTC GAGAACGCCG GCAAGAAGTC GGGCAAGGAC
TACATCTGCG CACCGGTGCC GGGCACGGCG AATGCTTACA CGTTCAACGT CGACTCGTTC
GTGTTCTTCC AGCAGAAGGG CGAGAAGGCG GCGACGCCGG GCCAGCTCGC GCTCGCGAAG
ACGATCATGA CGCCGGACTT CCAGGAACAG TTCAGCCTGC TGAAGGGTTC GGTGCCGGTC
CGTCTCGGCG TGAAGATGGA CAAGTTCGAC GACTGCGCGA AGAAGTCGTA TGCCGACGAG
CAGACCGCGA TCAAGTCGGG CGGCTTCGTT CCGTCGCTCG CGCACGGGAT GGCGCAGAGC
GATGCGACCG CCGGTGCGAT CACGGACGTC GTGACGAAGT TCATGAACTC GCAGCAGGAT
TCGAAGAGCG CGGTTGCCGC GCTCGCGAAG GCCGCGAAGG TCAAGTAA
 
Protein sequence
MKVRSIMGAL CAAGLMAGAV AAQAAENVTV LHWWTSGGES KAVGVLKDDL QKQGYVWKDF 
AVAGGAGAAA MTALKTKVIS GDSPSAAQIK GPLIQDWADQ GVLVNIDSAA GDWKQNLPPE
IDKIIKYKGH TVAAPFSVHR VNWLYINKAA LDKVGAKVPT TWPEFFAVAD KLKAAGIQPV
AMGGQPWQDL TLWEDVVLSQ GPAFYKKALV DLDQATLTSP QMLSVFDTVR KIQGYFDAGR
NGRDWNLATA MVINGKAGMQ FMGDWAKGEF ENAGKKSGKD YICAPVPGTA NAYTFNVDSF
VFFQQKGEKA ATPGQLALAK TIMTPDFQEQ FSLLKGSVPV RLGVKMDKFD DCAKKSYADE
QTAIKSGGFV PSLAHGMAQS DATAGAITDV VTKFMNSQQD SKSAVAALAK AAKVK