| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3930 |
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| Symbol | |
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| ID | 3749115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | - |
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| Start bp | 846869 |
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| End bp | 848311 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637762209 |
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| Product | TRAP-type uncharacterized transport system periplasmic component-like |
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| Protein accession | YP_368173 |
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| Protein GI | 78065404 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.282648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.013766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAG CCCGCCCTCG CCCGCCTCGC CGCATCCTCG CCCGCTTCGT CGCGGTGTCG
TGGCGCGACC TCGCGCTGTC GATCGGCCCG ACCGTGCTGC TCGCCATCGC GGCCGTCTGG
CTCGCGGTCA AGCTGATCCA GCCGGCACCG CCGTCCACGC TCGTGATCTC GTCCGGGCCG
CCCGGCAGCA CCTACTGGAA CGCCGCGCAG AAATACAAGA CGATCCTGGC GAAGAACGGC
GTCACGCTCG ACGTCCAGTC GTCCGAAGGG TCCGCCCAGA ACCTCGCGCG GCTGTCGAAC
CCGAACGCGC CGGTCGACGT CGGCTTCGTG CAGAGCGGCA TCGGCCCGAA GGAGCGCGAC
GAACACCTCG TGTCGCTCGG CAGCATCGGC TACGTGCCGC TCGCGATCAT GTATCGCGGC
CCGGTCGTCG CGCGCCTGTC CGACTTCAAG GGCAAGCGGC TCGCGCTCGG CGCGGAAGGC
AGCGGCGCAC GCGAGCTGAG CCTCGCCCTG CTGAAGATGA ACGGCATCGT GCCGGGCGGC
ACGACCGAAC TGCTACCGAC CGCCGGCGAG GACGCGGCCA CCGCGCTGCT CGACGGCAAG
ATCGACGCGG CCTTCCTGTC AGGCGACTCG ACGCAGATCC CGGTGATGGC GAAGCTGTTC
CGCGCGCCGG GCGTGCACGT GTATTCGTTC ACGCAGGCGG AAGCGTACGC GCGGCGCTTT
CCGTACCTGA CCGCGATCAC GCTGCCGATG GGCGTCTACG ATCTCGGTCA GAATCTCCCG
CCCGCCGACA TCCACACGGT TGCGCCGACC ATCGAACTCG TCGCGCGCGA TTCGCTGCAC
CCTGCACTGT CCGACCTGCT GATCGAGGCC GCGCGCGAGG TGCACGGCCA CGCGACGATC
CTGCAGCACG CGGGCGAATT CCCGTCGCCC GTCACGCGCG GCTTCCAGCT CTCCGACGAC
GCCGCGCGCT ACTACAAATC AGGGAAGACC TTCCTGTACC GGCGGCTGCC GTTCTGGGTC
GCGAGCCTCG TCGACCGGCT GCTCGTCGTG GTCGTGCCGC TGATCGTCGT GCTGATCCCC
GGGCTGCGGC TCGTGCCGTC GCTGTACGGC TGGCGCGTGC GCTCGCGCAT CTATCGCTGG
TACGGTGCGC TGATCGCGCT CGAGCGCAGC GCGCTCGGCG AACACACGGC CGAGGAGCGC
GTGCAGTTGC TCGACGAGCT CGACGACATC GAGGAAGCCG TGAACCGGAT GAAGATGCCG
CTGGCTTATG CCGGGCAGTT CTACGTGCTG CGCGAGCACA TCGGCTTCGT GCGCGAACGG
CTCACCGCGC ACGACCAGGA CACGCCGGCC AGCCCGCCGG GCGCCGGTGG CCCGCCGCAG
GCAAGTGCCG AAGCCGCGCC GCCGGCCGGC GATCCCCCTC GGGCGACTCC CGGTTCCGCG
TGA
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| Protein sequence | MKPARPRPPR RILARFVAVS WRDLALSIGP TVLLAIAAVW LAVKLIQPAP PSTLVISSGP
PGSTYWNAAQ KYKTILAKNG VTLDVQSSEG SAQNLARLSN PNAPVDVGFV QSGIGPKERD
EHLVSLGSIG YVPLAIMYRG PVVARLSDFK GKRLALGAEG SGARELSLAL LKMNGIVPGG
TTELLPTAGE DAATALLDGK IDAAFLSGDS TQIPVMAKLF RAPGVHVYSF TQAEAYARRF
PYLTAITLPM GVYDLGQNLP PADIHTVAPT IELVARDSLH PALSDLLIEA AREVHGHATI
LQHAGEFPSP VTRGFQLSDD AARYYKSGKT FLYRRLPFWV ASLVDRLLVV VVPLIVVLIP
GLRLVPSLYG WRVRSRIYRW YGALIALERS ALGEHTAEER VQLLDELDDI EEAVNRMKMP
LAYAGQFYVL REHIGFVRER LTAHDQDTPA SPPGAGGPPQ ASAEAAPPAG DPPRATPGSA
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