Gene Bcep18194_A3867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3867 
Symbol 
ID3749051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp778108 
End bp778761 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content46% 
IMG OID637762145 
ProductABC transporter, ATPase subunit 
Protein accessionYP_368110 
Protein GI78065341 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.794513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TCTCCAACGT CACTCGTCGC TACAATACTC GAAATGGTCA ACGCACCATC 
TTGAACAAAG TCAATTTGCG CGTCTTACGG GGTGAGAAGA TTGGCATTCT AGGTGGGAAT
GGCGCCGGCA AATCGACACT CATTCGACTG ATAAGCGGCG CCGAGCGCCC CGATGAAGGG
AAGGTTCGTC GGTCAATGAG CGTATCTTGG CCGCTGGCAT TTAGTGGCGG ATTTCAAGGC
ACCTTGACAG GATTCGATAA TCTGCGATTT ATTTGCAGAA TTTACAATGC CTCATACGAT
TCAACACTTC CTTACGTAGA ATCATTTTCC GAACTCGGCC CGTATTTACG CGAACCGGTT
AAAACATATT CGAGCGGGAT GCTCGCAAGA TACGCATTCT CCATCTCAAT GGCAATTGAA
TTCGATTGCT TTTTAATCGA TGAAGTTATT GCAGTCGGCG ACTCCCGATT TCAACAAAAA
TGCAACGAAG AATTATTTGA AAAAAGAAAA GATCGCTCGA TGATCATTGT TTCACACGAC
GCACACCGAA TTCGGGAACT GTGCACTCGC GCGTGCGTGC TTGAGAACGG CAAACTATAT
CAATTTCCCA ACGTTGAAGA CGCATACCAT TACTATGAAA GGAAAAAGAA ATAA
 
Protein sequence
MIELSNVTRR YNTRNGQRTI LNKVNLRVLR GEKIGILGGN GAGKSTLIRL ISGAERPDEG 
KVRRSMSVSW PLAFSGGFQG TLTGFDNLRF ICRIYNASYD STLPYVESFS ELGPYLREPV
KTYSSGMLAR YAFSISMAIE FDCFLIDEVI AVGDSRFQQK CNEELFEKRK DRSMIIVSHD
AHRIRELCTR ACVLENGKLY QFPNVEDAYH YYERKKK