| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3807 |
|---|
| Symbol | secF |
|---|
| ID | 3748992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 702199 |
|---|
| End bp | 703149 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637762087 |
|---|
| Product | preprotein translocase subunit SecF |
|---|
| Protein accession | YP_368052 |
|---|
| Protein GI | 78065283 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC GGCACGCGCT GGTGTTCAAC
GTGATCTCGC TGGTCACGTT CCTCGCCGCC GTGTTCTTCC TGTTCCACCG CGGGCTGCAC
CTGTCCGTCG AATTCACCGG CGGGACGGTG ATCGAGGTGC AGTACCAGCA GGCCGCTGAA
CTCGAACCCG TGCGCGCGAC GCTCGGCAAG CTCGGCTACG CCGACGCGCA GGTGCAGAAC
TTCGGCACAT CGCGCAACGT GCTGATCCGC CTGCAACTGA AGGAAGGCCT CACGTCCGCG
CAGCAGAGCG ACCAGGTGAT GGGCGCGCTG AAGGCGCAGA GCCCGGACGT CACGCTGCAG
CGCGTCGAGT TCGTCGGCCC GCAGGTCGGC CGGGAGCTCG CGACCGACGG CCTGCTCGCG
CTCGCGTGCG TCGTGATCGG CATCGTGATC TACCTGTCGT TCCGCTTCGA GTGGAAGTAC
GCAGTGGCCG GCATCATCGC CAACCTGCAC GACATCGTGA TCATTCTCGG CTTCTTCGCG
TTCTTCCAGT GGGAGTTCTC GCTGGCGGTG CTCGCGGCCA TCCTCGCGGT GCTCGGCTAC
TCGGTCAACG AGTCGGTCGT CATCTTCGAC CGGATCCGCG AAACGTTCCG CCGCGAACGC
AAGATGAGCG TGCAGGAAGT GATCAACCAC GCGATCACGA CCACGATGTC GCGTACGATC
ATCACGCACA CGTCGACCGA AATGATGGTG CTGTCGATGT TCTTCTTCGG CGGCCCGACG
CTGCACTACT TCGCACTCGC GCTGACGGTC GGCATCATGT TCGGCATCTA CTCGTCGGTG
TTCGTCGCGG GCTCGCTCGC GATGTGGCTC GGCATCAAGC GCGAAGACCT GATCAAGGAA
AAGAAGTCCG CGCACGATCC GGACGATCCG AACGCAGGCG CGCAGGTTTA A
|
|---|
| Protein sequence | MEFFRIRKDI PFMRHALVFN VISLVTFLAA VFFLFHRGLH LSVEFTGGTV IEVQYQQAAE
LEPVRATLGK LGYADAQVQN FGTSRNVLIR LQLKEGLTSA QQSDQVMGAL KAQSPDVTLQ
RVEFVGPQVG RELATDGLLA LACVVIGIVI YLSFRFEWKY AVAGIIANLH DIVIILGFFA
FFQWEFSLAV LAAILAVLGY SVNESVVIFD RIRETFRRER KMSVQEVINH AITTTMSRTI
ITHTSTEMMV LSMFFFGGPT LHYFALALTV GIMFGIYSSV FVAGSLAMWL GIKREDLIKE
KKSAHDPDDP NAGAQV
|
|---|
| |