| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3722 |
|---|
| Symbol | |
|---|
| ID | 3748906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 610203 |
|---|
| End bp | 612275 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637762002 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_367967 |
|---|
| Protein GI | 78065198 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.323338 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCGT GCCCCCGTTT CCTCGACTCG TTCTCCGGAC TCGACATGAC GACTTCGTCT
CCCGCCTCCA CCACCCTGAT GGCCAACGCG ATCCGTGCGC TCGCAATGGA CGCCGTCCAG
CAAGCGAACT CCGGCCACCC CGGCATGCCG ATGGGCATGG CCGAAATCGG CGTCGCGCTC
TGGTCGCGCC ATCTGAAGCA CAACCCGACG AACCCGCACT GGGCGGACCG CGACCGCTTC
GTGCTGTCGA ACGGCCATGG CTCGATGCTG CTGTACTCGC TGCTGCACCT GACCGGCTAC
GACCTGCCGA TGGAAGAGCT GAAGAACTTC CGCCAGCTGC ACTCGAAGAC GCCGGGCCAC
CCGGAATACG GCATCACGCC GGGCGTCGAG ACGACCACCG GCCCGCTCGG CCAGGGGCTC
GCGAACGCGG TCGGCATGGC GCTCGGCGAA GCGCTGATGG CCGACGAGTT CAACCGCGAC
GGCGCGAAGA TCGTCGATCA CCACACGTAC GTGTTCCTCG GCGACGGCTG CCTGATGGAA
GGCATCTCGC ACGAAGCCTG CTCGCTCGCC GGCACGCTGA AGCTGAACAA GCTGATCGCG
CTGTACGACG ACAACGGCAT CTCGATCGAC GGCGACGTCG TGAACTGGTT CCACGACGAC
ACCCCGAAGC GTTTCGAAGC CTACGGCTGG AACGTGATCC CGCACGTGAA CGGCCATGAC
GTCGACGCGG TCGACGCAGC CATCGCAAAG GCGAAGCTGT CGGACAAGCC GACGCTGATC
TGCTGCAAGA CGGTGATCGG CCAGGGCGCG GCGACCAAGG CCGGCGGCCA CGACGTGCAC
GGCGCGGCGC TCGGCGCGGA AGAAATCGCG AAGACGCGCG AAGCGCTCGG CTGGACGTGG
GCACCGTTCG TGATTCCGCA GGAAGTCTAT GCGGCATGGG ACGCGAAGGA AGCCGGCAAG
CGCGCGGAAA CCGAATGGGA TGCGACGTTC GCTGCTTATC GCGCCAAGTT CCCGGCAGAA
GCCGCTGAAT TCGAGCGCCG GATGGCCAAC CAGCTGCCGG CCGACTGGGC CGAAAAGGCT
GCGGCGATCA TCGCCGGCGC GAACGAGCGC GGCGAGACGG TGGCGACCCG CAAGGCGTCG
CAGCAGGCGA TCGAAGGCCT GGCTGCCGCG CTGCCCGAGC TGCTCGGCGG CTCGGCCGAC
CTGACCGGCT CGAACCTGAC CAACTGGAAG GCGTCGAAGG CCGTCCGTGC GAATCCGGAA
GGCCCGGGCG TCCAGCTGGG CAACCACATC AACTACGGCG TGCGCGAATT CGGCATGAGC
GCCGCGATCA ACGGCCTCGC GCTGCATGGC GGCCACAAGC CGTTCGGCGG CACGTTCCTG
ACGTTCTCCG ACTACAGCCG CAACGCGCTG CGCGTGGCTG CGCTGATGAA GGTGCCGTCG
ATCTTCGTGT TCACGCACGA TTCGATCGGC CTCGGCGAAG ACGGCCCGAC GCACCAGTCG
ATCGAGCACG TGTCGAGCCT GCGCCTGATC CCGAACCACG ACGTGTGGCG CCCGGCCGAC
ACGGTCGAGA CGGCCGTCGC ATGGACCCAC GCGATCGCCG CCGACCGTCC GTCGAGCCTG
ATCTTCAGCC GCCAGAACCT CGCGTTCAAC CCGCGTACCG ATGCGCAGAT CGCGAACATC
GAGAAGGGCG GTTACGTGCT GAAGGACTGG GACGAAGAGA TCGTCGCGCG CAAGATCATC
CTGATCGCGA CGGGCTCGGA AGTCGAACTC GCGATGAAGG CCATCGAGCC GCTCGCGCAG
CAAGGTATCG CGGCACGTGT CGTGTCGATG CCGTCGACCA ACGTGTTCGA CCGCCAGGAC
GCCGAATACC GTGAACGCGT GCTGCCGCAC GGCGTGCGCC GCGTCGCGAT CGAAGCGGGC
GTGACCGCCT TCTGGCACAA GTACGTCGGC CTCGAAGGCG GCGTCGTCGG GATCGACACG
TTCGGTGAAT CGGCGCCGGC CGGCGTGCTG TTCAAGTACT TCGGCTTCAC CGTCGAGCAC
GTCGTCGAGA CCGCCAAGGC CGTGCTGGCC TAA
|
|---|
| Protein sequence | MPPCPRFLDS FSGLDMTTSS PASTTLMANA IRALAMDAVQ QANSGHPGMP MGMAEIGVAL
WSRHLKHNPT NPHWADRDRF VLSNGHGSML LYSLLHLTGY DLPMEELKNF RQLHSKTPGH
PEYGITPGVE TTTGPLGQGL ANAVGMALGE ALMADEFNRD GAKIVDHHTY VFLGDGCLME
GISHEACSLA GTLKLNKLIA LYDDNGISID GDVVNWFHDD TPKRFEAYGW NVIPHVNGHD
VDAVDAAIAK AKLSDKPTLI CCKTVIGQGA ATKAGGHDVH GAALGAEEIA KTREALGWTW
APFVIPQEVY AAWDAKEAGK RAETEWDATF AAYRAKFPAE AAEFERRMAN QLPADWAEKA
AAIIAGANER GETVATRKAS QQAIEGLAAA LPELLGGSAD LTGSNLTNWK ASKAVRANPE
GPGVQLGNHI NYGVREFGMS AAINGLALHG GHKPFGGTFL TFSDYSRNAL RVAALMKVPS
IFVFTHDSIG LGEDGPTHQS IEHVSSLRLI PNHDVWRPAD TVETAVAWTH AIAADRPSSL
IFSRQNLAFN PRTDAQIANI EKGGYVLKDW DEEIVARKII LIATGSEVEL AMKAIEPLAQ
QGIAARVVSM PSTNVFDRQD AEYRERVLPH GVRRVAIEAG VTAFWHKYVG LEGGVVGIDT
FGESAPAGVL FKYFGFTVEH VVETAKAVLA
|
|---|
| |