Gene Bcep18194_A3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3597 
SymbolprfA 
ID3748775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp469536 
End bp470618 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content66% 
IMG OID637761871 
Productpeptide chain release factor 1 
Protein accessionYP_367842 
Protein GI78065073 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGA GCATGCAACG CAAGCTCGAC CAGCTGTCCA CACGGCTGGC CGAACTGAAC 
GACCTGCTGA GCCGCGAAAA CGTCACGGCC GACCTCGACC AGTACCGCAA GCTCACACGT
GAACACGCGG AACTCGGCCC GGTGGTCGAA CAGTACGCGC TGTGGCGCCA GTCGCGCAGC
GACGAGACGG CTGCACAGGA ACTGCTCGGC GATCTGTCGA TGCGCGACTT CGCGGAAGAC
GAAATCCGCA GTGCGCGCGA GAGCATGTCC CGCCTCGAGA CCGAGCTGCA GAAGATGCTG
CTGCCGAAGG ATCCGAACGA CGAGCGCAAC ATCTTCCTCG AAATCCGTGC GGGCACGGGC
GGCGACGAAT CGGCGCTGTT CGCGGGCGAC CTGCTGCGCA TGTACCTGCG CTTCGCGGAA
CGCCAGCGCT GGCAGGTCGA AATGATGTCG GAAAGTGCGT CGGATCTCGG CGGCTACAAG
GAAGTGATCG TGCGGATCGC GGGCCAGGGC GCGTATTCGC GCCTGAAGTT CGAATCGGGC
GGCCATCGCG TGCAGCGCGT GCCCGCCACC GAAACGCAGG GGCGCATCCA CACGTCCGCG
TGCACGGTCG CGGTGATGCC GGAAGCCGAC GAAATCGGCG AGGTCGAGAT CAATCCGGCC
GACCTGCGGA TCGACACGTT CCGCGCGTCC GGCGCGGGCG GCCAGCACAT CAACAAGACC
GATTCGGCAG TGCGCGTCAC GCACATCCCG ACCGGGATCG TCGTGGAGTG CCAGGACGAC
CGTTCGCAGC ACAAGAACAA GGATCGCGCG CTGAAGGTGC TCGCCGCGCG CATCAAGGAC
AAGCAGTATC ACGAGCAGCA CGCGAAGGAA GCCGCGACGC GCAAGAGCCT GATCGGCTCC
GGCGACCGCT CGGAACGGAT CCGCACGTAC AACTTCCCGC AGGGCCGGAT GACCGACCAC
CGGATCAACC TGACGCTGTA CCGGCTCGAG GCGCTCATGG ACGGCGACCT CGACGAACTG
ATCAGCGCGC TGGTCAGCGA ACACCAGGCC GAACTGCTCG CGTCGCTCGG CGATGCCGAC
TGA
 
Protein sequence
MKTSMQRKLD QLSTRLAELN DLLSRENVTA DLDQYRKLTR EHAELGPVVE QYALWRQSRS 
DETAAQELLG DLSMRDFAED EIRSARESMS RLETELQKML LPKDPNDERN IFLEIRAGTG
GDESALFAGD LLRMYLRFAE RQRWQVEMMS ESASDLGGYK EVIVRIAGQG AYSRLKFESG
GHRVQRVPAT ETQGRIHTSA CTVAVMPEAD EIGEVEINPA DLRIDTFRAS GAGGQHINKT
DSAVRVTHIP TGIVVECQDD RSQHKNKDRA LKVLAARIKD KQYHEQHAKE AATRKSLIGS
GDRSERIRTY NFPQGRMTDH RINLTLYRLE ALMDGDLDEL ISALVSEHQA ELLASLGDAD