| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3575 |
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| Symbol | |
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| ID | 3748753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | - |
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| Start bp | 443878 |
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| End bp | 447825 |
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| Gene Length | 3948 bp |
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| Protein Length | 1315 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637761849 |
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| Product | hypothetical protein |
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| Protein accession | YP_367820 |
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| Protein GI | 78065051 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA TCCTCAACGT GCTGACTCAT CCGCGTACGC TCTCGATCGT CGGGATCGTC
GCGCTAGCGG CCATTCTCTT CATCGTCGCC GACATGCTGC AACTGCCGCT CCTGTGGGCG
GCGATCGCGT TCGCGACGAT CCTCGCACTG TGGCTCGTCG TCGCGCTGTG GCGCCGCTGG
CGCGTGAAGC GCGCGAACCA GCAGCTCGGC CAGGTGCTGG AAGAGCAGGC GGAAACCGGC
AAGATCGCCG CGCCCGCCGC CGCCGCACTC GCCCCCGACT CGAAGACGGC CGACCTGGAC
GTGCTGCGCA CGCGCCTGTC CGATGCGGTG AAGACGATCA AGACGTCGAA GATCGGCCAG
GTGTCGGGCG GCTCCGCGCT GTACGAACTG CCGTGGTACA TCGTGATCGG CAACCCGGCC
GCGGGCAAGA GCAGCGCCGT GCTCAATTCC GGCCTGCAAT TCCCGTTCGC GGACAAGAAC
AGCGCCGTGA TCCACGGCAT CGGCGGTACG CGTAACTGCG ACTGGTTCTT CACGACCGAG
GGGATCCTGC TCGACACGGC CGGCCGCTAT TCGGTGCACG AGGAAGACCG CAGCGAATGG
CTCGGCTTCC TCGGCCTGCT CAAGCGCTAT CGCCCGAAGG CGCCGATCAA CGGCATCATC
GTCACCGCGA GCATCGCCGA ACTCACCGGC AACCGCCCCG AATTTGCGAT CAACCTCGCG
AAAAACCTCC GTCAGCGCGT TCAGGAGCTG ACGGAGAAGC TCGAAGTGTT CGCGCCGGTC
TACGTGATGT TCACGAAGGC CGACCTGATC ACCGGCTTCA CCGAATTCTT CAGCAGCAGC
GACAAGCACG AGTACGACCG CGTGTGGGGC GCCACCCTGC CCTACGAGCC CGACGACAAG
CGCGACGTCG TCGCGCAGTT CGACACGCAC TTCGAGGAAC TCTACGAAGG GCTGAAGGAG
ATCAGCGTCG CGCAGCTGTC GCTGTCGCGC GGCAACCAGC TGTCGCCGGG CCAGTTGAGC
TTCCCGCTCG AATTCTCGAC GATCAAGCCG TCGCTGCGCG CGTTCCTCGC GACGCTGTTC
GAGAACAACC CGTTCCAGTA CAAGCCGATC TTCCGCGGCT TCTACTTCAC CAGCGCGCTG
CAGGAAGGCG AAACCAACAG CGCGGCCGCG CAGCGCATCG CGCATCGCTT CGGCCTCGAC
GGCGCCGCAC TGCCGAAGCC GCACAGTGCG TTCTCGAAGA ACGGCTTCTT CCTGCGCGAC
CTGTTCTCGA AGGTGATCTT CGCGGATCGC CAGACGGTGC GGCAGTTCGC GAGCCCGACC
AAGACGCGGC TGCGCTACGC GACCTTCTTC GGCTTCGTCG CGGCGCTTGC GCTCGCGCTC
GGCGGCTGGA CCTGGTCGAC GATCGGCAAC CAGCAGCTCG TCGCGAACGT GCAGGCCGAC
CTCGACAACG TCACGCGCCT GCAGCAGGGC CGCAACGACC TGCAGTCGCG CCTGCAGGCG
ATGGACATCC TCGAAGACCG GATCGAGCAG CTCGAACAGT TCCGCCGCGA CAAGCCGGTT
TCGGTGTCGC TCGGCCTGTA CCAGGGCGAC CGTCTCGAGC AGCACCTGCT GACCGAGTAC
TACAACGGCG TGCGCCAGAT CCTGCTGGCC CCGGTGTCGC AGAACCTCGC GTCGTTCATG
AAGGACGTGA ACGCGCACCC CGAACAGCTC GTGCCGATGA CGCGCCCGCC CGAATCAGGC
GCCGTGCAGG GTGGCGCGAT GCCGGTCTCG ACGAACGCGG CAGGTGCCGC GCCGCAGGCC
GGTGCCGCAC TGGCCGCATC CGGCACCGTG CCGGCCGCGG CCCCGCAGCA GCCGGCCGCA
CCGCAGGGCG GCCTCTACAG CGACGCGTCG CCGACCAACG TGCAGGACGC GTACAACGCG
CTCAAGACGT ACCTGATGCT GTCCGACAAG CGTCACGTCG AGCAGGCGCA CCTGACCGAC
CAGCTCGCCC GCTTCTGGCG CGGCTGGCTC GAGACGAATC GCGGCAACAT GCCGCGTGAC
GAGATGATCA AGAGCGCGGA GCGCATGATC TCGTTCTACC TGTCCCGCGT GAACGACGAC
GACTGGCCGA TGATCGACGC GAACCTCGCG CTCGTCGACC AGACCCGCGA GAACCTGCGC
CACGTCGTGC GCGGCATGCC GGCCCGCCAG CGCGTGTACG AGGAAATCAA GGCACGCGCG
TCGACCCGCT TCGCGCCGAT GACCATCGCG CGCATCGTCG GCGACGGCAA CCAGGGGCTC
GTGGCAGGCA GCTACGCGAT TCCGGGCACG TTCACGCGCG AAGCGTGGTT CGACTACGTG
CAGCCGGCGA TCCGCGACGC GGCGACCAAG GAACTGCAGG CGAAGGACTG GGTGCTGAAC
ACGTCGACGC AGGATGACCT GACGCTCGAG GGCAGCCCCG AGCAGATCCA GAAGACGCTC
GTCGGCATGT ACAAGACCGA GTACGCGCAG CACTGGCAGA AGTTCATGCA GGGCATCGCG
GTGCAGGGCT TCAGCAGCTT CGGCCAGGCC GTCGACGGGA TGAACCGCCT CGGCGACCCG
CAGGATTCGC CGATCCGCAA GATCCTCGAG ACCGCGTACG ACCAGACGTC GTGGGACAAC
CCGTCGCTCG CGAACGTGAC GATCAAGAAG GCGCAGACGG GCGTCGTGAA CTGGGTCAAG
CAACTGTTCT CGCGCTCGCA GGCCGGCCAG GTGGCGGCTG CCAACATCGA CATCAACGGC
AATCCGGCCG AGGTGCCGAT GGGTCCGATC GGCCAGGAGT TCATCGGGCT CGCGCGGATC
GTCGCGACGC ATGACGGCAC GTCGATGCTC AAGGGCTACA TGGATTCGCT GTCGAAGGTC
CGCACGCGCT TCAACGTGAT CAAGAACCAG GGCGACCCGG GCCCGGGCGC GCGCCAGCTG
ATGCAGCAGA CGCTCGACGG CAACGGCTCG GAACTCGCCG ATTCGCTGAA GCTGGTCGAC
GAGCAGATGC TGACGGGCCT CACCGATTCG CAACGCAAGT CGCTGCGTCC GCTGCTCGTG
CGGCCGCTGA TGCAGGCGTT CGCGGTCGTG ATCCAGCCGG CCAGCGCGGA AGTCAACAAG
GTATGGAACG CGCAGGTCTA CCAGCCGTTC CAGAACTCGC TCGCGACGAA GTACCCGTTC
GCGGCGAGCG CGAAGGTCGA GGCCGGCGCC GGTGAAATCG CGCAGGTGTT CGGTCCGGAC
GGCTCGATCG CGAAGTTCGT CGGCACGACG CTCGGGCCGC TCGCGGTGCG CCGCGGCGAC
ACCCTCGCCG CCCGCACGTG GGGCGACATG GGCATCGGCC TCACGCCGGA CTTCACCAGC
GGCTTCGCGC GCTGGGTCGC GCCGCTCGCC GGCGGTGCGG CAGGCAGCGC CGCCGCGTCG
TCCGAGCCGC AGACCGTGTT CCAGATCCTG CCGCAGCCGA GCACGGGCAC GACGGAATAC
ACGATCGCGA TCGACGGCCA GCAACTGCGC TACCGCAACA CGCCGCCGCA GTGGACCAAC
TTCGTGTGGC CGAACCCGCA GGGTTCGCCG GGCGCGACGC TGTCCGCGAC GACCTTCGAC
GGCCGCACGG TGCAGCTCGT CAACGAGCCG GGCCGCTACG GTCTCGAGAA GCTGATCAAC
TCCGCGCAAC GCAAGCGCCG TCCGGACGGC ACCTTCGACC TGACGTGGGC GCAGGGCAGC
GTGAACGTGT CGGTGACGAT GCGCATCATC AGCACGTCGC AACCGTCCGG CGGTGGCGGT
GACCAGCCGC AGCAGCAGAG CCTGCGCGGC CTGCAGCTGC CGTCGTCGGT CGCCGACGCG
AGCACGGGCG CCGCGCAGAA CGCGACCCAG TCCGCCGGCA CGGGCACGCC GGCCGCAGCG
CCGGCCGTCG CGGCCGCCAA CGCAACGAAT GCCCAGGGGG CGCAATGA
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| Protein sequence | MQRILNVLTH PRTLSIVGIV ALAAILFIVA DMLQLPLLWA AIAFATILAL WLVVALWRRW
RVKRANQQLG QVLEEQAETG KIAAPAAAAL APDSKTADLD VLRTRLSDAV KTIKTSKIGQ
VSGGSALYEL PWYIVIGNPA AGKSSAVLNS GLQFPFADKN SAVIHGIGGT RNCDWFFTTE
GILLDTAGRY SVHEEDRSEW LGFLGLLKRY RPKAPINGII VTASIAELTG NRPEFAINLA
KNLRQRVQEL TEKLEVFAPV YVMFTKADLI TGFTEFFSSS DKHEYDRVWG ATLPYEPDDK
RDVVAQFDTH FEELYEGLKE ISVAQLSLSR GNQLSPGQLS FPLEFSTIKP SLRAFLATLF
ENNPFQYKPI FRGFYFTSAL QEGETNSAAA QRIAHRFGLD GAALPKPHSA FSKNGFFLRD
LFSKVIFADR QTVRQFASPT KTRLRYATFF GFVAALALAL GGWTWSTIGN QQLVANVQAD
LDNVTRLQQG RNDLQSRLQA MDILEDRIEQ LEQFRRDKPV SVSLGLYQGD RLEQHLLTEY
YNGVRQILLA PVSQNLASFM KDVNAHPEQL VPMTRPPESG AVQGGAMPVS TNAAGAAPQA
GAALAASGTV PAAAPQQPAA PQGGLYSDAS PTNVQDAYNA LKTYLMLSDK RHVEQAHLTD
QLARFWRGWL ETNRGNMPRD EMIKSAERMI SFYLSRVNDD DWPMIDANLA LVDQTRENLR
HVVRGMPARQ RVYEEIKARA STRFAPMTIA RIVGDGNQGL VAGSYAIPGT FTREAWFDYV
QPAIRDAATK ELQAKDWVLN TSTQDDLTLE GSPEQIQKTL VGMYKTEYAQ HWQKFMQGIA
VQGFSSFGQA VDGMNRLGDP QDSPIRKILE TAYDQTSWDN PSLANVTIKK AQTGVVNWVK
QLFSRSQAGQ VAAANIDING NPAEVPMGPI GQEFIGLARI VATHDGTSML KGYMDSLSKV
RTRFNVIKNQ GDPGPGARQL MQQTLDGNGS ELADSLKLVD EQMLTGLTDS QRKSLRPLLV
RPLMQAFAVV IQPASAEVNK VWNAQVYQPF QNSLATKYPF AASAKVEAGA GEIAQVFGPD
GSIAKFVGTT LGPLAVRRGD TLAARTWGDM GIGLTPDFTS GFARWVAPLA GGAAGSAAAS
SEPQTVFQIL PQPSTGTTEY TIAIDGQQLR YRNTPPQWTN FVWPNPQGSP GATLSATTFD
GRTVQLVNEP GRYGLEKLIN SAQRKRRPDG TFDLTWAQGS VNVSVTMRII STSQPSGGGG
DQPQQQSLRG LQLPSSVADA STGAAQNATQ SAGTGTPAAA PAVAAANATN AQGAQ
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