Gene Bcep18194_A3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3561 
Symbol 
ID3748739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp426923 
End bp427426 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content59% 
IMG OID637761835 
Producthypothetical protein 
Protein accessionYP_367806 
Protein GI78065037 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00586235 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.966398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACATA TGCACTTGCA GTTTGGTAGT CCCGCGGTGA AGGGCGAATC CGCGGACAAG 
GACCACCAGG GCTGGATCGA GCTGAAATCG TGGGATCACT CGATCGTTCA ACCGCGTTCG
GCAACCGCAT CGACCGCAGG CGGTCACACG ATGACGCGTT GCGAACACGG CGACATGATT
TTCACGAAGG AAATCGATTC GTCGAGCCCG CTGCTGTACC AACACGCTTC GGGCGGCACC
ACGTTCGACG AGGTGACGGT CCATTTCTCG CGCGCTGACG GTGAAGGCAA GCGCGTGCAG
TATCTGGAAG TCAAGCTCAA GTACGTGATC ATCTCGAGCA TCGCCCCGAG CGTTCGCGAA
GAAGGTCTGC CGCTCGAGAC GTTCTCGCTG AAGTACGCAG CTGTGCAGTG GAAGCAAACC
CAGCAGAAGA TCGGCGGCAA CCAGGGCGGC AACACGCAAG GCGCCTGGAG TCTGACGAAG
AACGACAAGA CCTACGCGGT CTAA
 
Protein sequence
MLHMHLQFGS PAVKGESADK DHQGWIELKS WDHSIVQPRS ATASTAGGHT MTRCEHGDMI 
FTKEIDSSSP LLYQHASGGT TFDEVTVHFS RADGEGKRVQ YLEVKLKYVI ISSIAPSVRE
EGLPLETFSL KYAAVQWKQT QQKIGGNQGG NTQGAWSLTK NDKTYAV