| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3558 |
|---|
| Symbol | |
|---|
| ID | 3748736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 424146 |
|---|
| End bp | 424784 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637761832 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_367803 |
|---|
| Protein GI | 78065034 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000842214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.636992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACC GTCTCTTCGC AAAACTGTCT GGGGTAGTAG TGGCTTGCGG CGTGATCGCC
GGTTGTGCGA GCCAGCCTCC CGCACCGCCG ACTGCCGAAG TGTTCAACAA GTCGCTGGCG
GATGCGGACG CAGTTGCGAA GGCGGGGGAC CAGGACAAGG CGCTCGGCCT CTATCAGCAG
CTCGCGAAGT CGGATCCGAC GCGCGAAGAG CCGTGGTCGC GCATCGCGCA AATCCAGTTC
GCCCAGAACC ACTACGGCCA GGCAATCGTT GCCGCGCAGG AAGCCCTGCA GCGCGACGCG
ACCGACCGTC AGGCGAAGAG CGTGCTGGCC GTGGCCGGCC TGCGGATCGC GACGCAGTCG
CTCGGCGAAC TGCGCCAGGA TTCGTCGCTC GCGGGTGACG CGAAGTCGGA TGCGCAGGCG
CTCGCGAAGC AGCTGCGCGA TACGCTGGGC GAATCGGCGC TGTTCCCGCC GGAAACGACG
ACCCGCGCCA CGGGCCGGGG CAAGAAGGGT CGTACGGTCG TCCATACGAA GAAGGCCCAG
ACGCAGACCG CCGAATCGAA CGTCGCGCCG CCGCCGACCA ACACGTCGTC GGGCGGCGGG
GCGAAGGGCG GTGACCCGTT CGGCGCACTG CGCAACTGA
|
|---|
| Protein sequence | MKDRLFAKLS GVVVACGVIA GCASQPPAPP TAEVFNKSLA DADAVAKAGD QDKALGLYQQ
LAKSDPTREE PWSRIAQIQF AQNHYGQAIV AAQEALQRDA TDRQAKSVLA VAGLRIATQS
LGELRQDSSL AGDAKSDAQA LAKQLRDTLG ESALFPPETT TRATGRGKKG RTVVHTKKAQ
TQTAESNVAP PPTNTSSGGG AKGGDPFGAL RN
|
|---|
| |