Gene Bcep18194_A3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3557 
Symbol 
ID3748735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp423160 
End bp423771 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID637761831 
Producthypothetical protein 
Protein accessionYP_367802 
Protein GI78065033 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0566246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.386059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCGT TGATGATTCG CTACGCGCTG CCACTGGTTG CCTGCGCCCT TCTGGCCGGA 
TGCGCGGCCG CCCCGCTGCT CGGCTCGGCC GCGAGCGCCG TGATGTCCGC GGCCGGGATC
GGCAAGCCCG AGGTGCCCGA CGCGCAGAAG CCGCCGCGCA ACCTCGGCAT CACGCTCGCC
GCGGCGCCGA ACCTGAACGC CGCGACCGAC AACAAGCCGC TCGCGCTCGT CGTGCGGCTC
TATACGCTGA AGGACCCGAC ATCGTTCCAG CAGGCGCCGT TCGATGCCTT TACGGATCCG
ACCAAGGAAA AGGCCGCGCT GGGCGCCGAC CTGCTGAACG TGCGTGAAAT CACGCTGATT
CCGGGCCAGC GCTATACGGC GACCGAGAAG GTTTCGCGCG AAGCGCAGGC ATTCGGCATC
GTCGCGCTGT TCCGCGATCC CGCACTACAA CGATGGAAAC TGACGTTCGA TCCGGTGAAG
TCGGAGAAAT CCGGCATAAT CATCGGCCTG CATAATTGCG CGATGACGGT CACCGACGGC
ACTGTCATCG CACCGCAACA GGGTGCGCCT TCGCAACCGC TGAATTTGCT TTCTTCGGTC
TCCTGCGGTT AA
 
Protein sequence
MRSLMIRYAL PLVACALLAG CAAAPLLGSA ASAVMSAAGI GKPEVPDAQK PPRNLGITLA 
AAPNLNAATD NKPLALVVRL YTLKDPTSFQ QAPFDAFTDP TKEKAALGAD LLNVREITLI
PGQRYTATEK VSREAQAFGI VALFRDPALQ RWKLTFDPVK SEKSGIIIGL HNCAMTVTDG
TVIAPQQGAP SQPLNLLSSV SCG