| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3550 |
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| Symbol | |
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| ID | 3748728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | + |
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| Start bp | 414182 |
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| End bp | 418864 |
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| Gene Length | 4683 bp |
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| Protein Length | 1560 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637761825 |
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| Product | Rhs family protein |
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| Protein accession | YP_367796 |
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| Protein GI | 78065027 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.955949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG CGGGCGTCCT TCAACCCAAA CCTACCGATG TGTTCGTGTC TCCGATCATG
AAGATCACGG AGGCCGACGT ACAAGCCGGC ATCGATGTAT TCGACAAGTG GCTGATCAAG
GTCAGCGGCG GCGTGGTCAA CGTCGGCCGG CTGAAGACGG TCGCGGAGAA CGTGCCGGTT
CTGGCCAATA TCTTTGCGGC AGTCGATGCG GTGCTCGACA TCAAGGCGAT GATCGAGCAT
GGCGATGAAC CGATCGACAT GTTCGACTGG GTCAACCTCG GTCTCGATCT GATCGGGGTC
GTGCCGTTGC CGCCGGCTAC CGCCGAGCTT CGGCTCGGCG CGCGCCCGGT GCTGAAGCTC
ATTCGGCAAG AGATCGTCAA AAGTGGCAAG GCGGTGGGCG AGGCAGCGTT GCAGGTGCTG
CGGGATTCGG TCATCTCCGC AATCGTCGCG AACGTGCAGG AGCGTTATGC GGGCGAGATC
GAAAAATTCC TGAAGGTGAT ACGTGACGGG CTGAAGGAGC TGCTCGAGCA CTGCGCCAAA
TTCATCGGCG ATCTGATGAA GGCGATCGCC GACGTGTTCG CCCATGCGGC GGGGAAGAAG
TACGAAGTCG GGCACAACGT GAAGTCGGCC GGGTCGCATC TGAAGGGTGT CGGGGAGGCT
ATCGTTGCGT ACGACGGCAG GAAGATCCTC GACAATTTCG GCGGATTCCT CTCGGACATC
CGCAAGGTCG AGGGGAAGGT CGTTATCAAC ACGGCGACCT CCGCCGCCGA TCTGATCACC
CCGAATTCGA CGAAGAAGCT TCAGCTCTTC GCCGACGATA TCTACAAGCG GATTCCGACG
GTCCAGAAGT GCATTCGCGA GCTCGACGGG AACGATGCGG GCAAGATCGG GTGGATCATC
ACGATCGGTG AAGACGGCAT GCGGAGCTGG CGCAAGAGCC ATCCGAAGCC GCAGTCGGCG
GGGATTCAGG AACACAAGAC GGCGAAGGTC AAAGAGACGC GTCCGGAACA TCGAATTGAC
GAGGTTCAAA AAACCACTGA AGCGCATCAT CCGGGGCCGA GTTGTTGCCC GACACATACC
CCGGTGAAGA CGCCACCTGC CGCCACCCTG AATTCAATCG GATTCGCGCT CGGCGACGAG
CAAATCAATC ACGAAGACTT CACGATCGAC GGGCCGTTAC CCATTGCCTG GGCGCGTACC
TATCGATCGT TCTTCGACGC GAACGACGAG CAGGGCGAAC TAGGCGCACG CTGGATCACG
CCGTATACGA CGCGTTTCGA TATTGCTGCG GAAAAGCTCG TCTATCACGA TGCCGCCGGA
CGAAGTATCG AATACCCGCT ACTCGGTGTT GGAAGTGCGC ATGATGATCT TTCCGAGGGA
CAGACGTTAT TGCGGCTGGA CGAGCAGTGG CTGACGGTGA CGCGCGGACA TACGCTGCTC
GAAGCGTACG AGCGGCACGG CAACGTGTTC CGTCTCGCAT TCGTCAAGGA CCGCGCCGGC
AATCAGGTGA CGCTCGACTA CGATACCGAA GGGCGGTTGC ATCGCCTGAT TGCATCGCAC
GTTCAGGTTG CGTTCCGACA TGACGTGCGG GGGCGGATCG TTGGCATTAC GCATCATGAC
GCACAAGGCG AGTACGTCGG CACACTTGCG AGCTACGAGT ACGACGACCA GAACGATCTG
ATCGGGGCGA CGGACCGCTA CGGTAATCGC CGCGAGTACC GTTATCGACA CCACCTCGTG
ACGCGATATA CCGATCGCAC TGGCCGCGGT GTGAACCTCG AGTGGAACGG TGACGGCCCG
AAGGCAAAAT GCTTCCGCGA ATACGCCGAC GACGGCAGCG ATGAGGTCCG CCTCGCGTGG
CATCCGGACT TCCGGATGGT CAGCGTGACC GACGCGCTCG GCAATGTCAC GCACCACTAC
TACGACAGCA AGGGTTATTC GTTCCGTGTG ATTCATCCGG ACGGTAGCGA AGAGTGGATG
TATCGGGACG CGAACGACAA ACTCGTTCAG TACATCCATC GTGACGGTAC CGTCGAGCAG
ATGGAATACG ATGTGCGCGG CAACTTCGTA CGCCATCAGC GTACCGACGG CAGCGTGGTC
GAGATGGCGT ACGACCAGAA GGACCAGCTC GTTCGCGTGA CCGATCCACT TGGGCATCCG
TGGCTGCGTG AATATGACGA TGCGGGGAAC ATGGTGGCGG AAGTCGACCC GCTCGGCCAC
AAGACCGAAT ATGCGTACGA CGGGCGAGGA CTGCTTACCC GGATCAAGGA TGCGAAGGGA
GGCGTGAAAG CGCTGAAGTA CGACGACGTC GGCCAGTTGA CCGGTTATAC CGATTGCTCG
GGCAAGACGT CGCAGTGGGC GTATGACGCG CAGGGGCGCC TCTCGGAAGC GAAGGATGCG
GCGGGTGGGG TAACTGCATA CCGTTATGGT GCGAATGGCC AGTTGATCGA AGTCGTGTCG
CCGGCGGGGC GCGAGCAACT GAGCTACGAC GCGGAAGGGC GTCTGCTGAC CCATATCGAT
CCGCTGAACC GCAACACGCG TTACGGCTAC GACGCGAGCG GGCGTATCAA TATCCGCACC
GATGCGTTGG GGCAATCGCT GTCATATCGC TATGACCGGC TCGGGCGGAT CGTTGGGCTG
ACCAACCAGA ATCACGCGAA TTACTCGTTT CGCTATGACG TGGCAGGTCG AATGATCGAG
GAGATCGATT TCGACGGGAA GGCCACGCGC TATTCGTATG ACGAGGCGAG CAGCCGTCTC
GAATCGGTCG ACGAGGCGGG ACAGGTCATG ACGATGTCCC ACGATCGCGG TGGACGGCTT
AATGGCCGTT CGGTCGGCGA AGAGGCGGAG CGTTTCTCGT ACGACCCGCT GGGACGATTG
ATCGAGGCCA GCAATCGATA TAGCCGCGTT CAACGGTTCT TCGACCCGGC CGGTAATCTG
GTGCGCGAGC ATCACGCTTA CGACCTGTTC GGTTCGAGCC GGAGTTTCGT ATGGCATCAC
CGGTACGACG AAATCGGCAA CCGGATCGGA ACGGTCCGGC CGGACGGCCA TGCAGTCGAC
TGGCTCACGT ACGGCTCGGG ACACGTCCAC GGGTTGATGC TCGACGGCAA GGAACTCGTT
CAGATCGAGC GGGACGATCT GCATCGGGAA ACGTTGCGCA CCCTGCCGAG CAAGATCGAT
CAACACACTG CATACGATCG TGCAGGCAGG TTGGCGCAGC GTACGGTACA GCGTGCGAAT
GCACCCGCGC CGCTGGCGGA GCGTCGGTAT CGTTACGACG CGGCCGGCCA ACTCGTACAG
ATTGAAGACA ATCGCAGAGG ATTGACGGAC TATCGTTACG ATCCGGTCGG ACGGTTGCTC
GAGTCGATCG GACCGGCGGG CAAGGAGCGG TTCGCGTTCG ATCCGGCGAG CAATATCATC
GACCCGGTAC GTGTTGAAGC GCCTCGCACG GAGAGCCGGC CGAGTCCGGT ACGTGCTACC
GAGAGTACGT TGCCTGCGGA AGTGCCCAAG GTGTTGGGCA ACTTGTTGAA GCAATATGCG
GGGGAGCATT TCGCGTACGA CGCGCGCGGC AATCTCGTCC ATCGCAGATC GCCAGCGGGT
GAGCAGCGTT ACGAGTGGAA CGCGTTCAAT CGGATGACTG CGGCGACGGT TGACGAGGTC
GCTCGCAGGA GCGAGTCGCG GTACTACTAC GATGCGCTGG GCCGTCGTAT TGCGAAAGAG
GTGAACGGCG AGCGCACGGT GTTCGGGTGG GATGGCGATA CGCTGGCATA TGAGAGTGGG
GAGCAGGGCA GCACGCATTA CCTTTACGAA GCGGGTTCGT TCGTGCCGAT GGTGCAGTAC
GCGAGTGCAT CGGTAGACGG GTTCGAGACG CCGTCGCGCC GTGAGACCGA TCGGTATGTA
CCGGAAGACG ATCCGTTGCA ACGGTTGCCG GAGCGGGTGG GGGATGCGCA CGCGTTCTAT
TACCACTGCG ACCAGATCGG CACACCGCAA TTGCTGACGG ATGACGAAGG CGATGTGGTG
TGGGAGGCGT CGTATAAGGC GTGGGGGGAA GCGCGGGAGG TGATCGCGCG GGCGTCGAAG
GTGGCGGGGA TCGTGCCGAG GAGTTCGTTG CGGTTTCAGG GGCAACAGGT TGATGATGAA
ACGGGGCTGC ACTACAACCG GCACCGGTAC TATGATCCGA GATCGGGGCG TTTCGTATCG
AAAGACCCGA TCGGGCTCGC TGGCGGCATC AACGTTTATC AATACGCGCC CAATCCGGTC
AAGTGGGTCG ATCCGTTAGG GCTATCGAAG TCCGAGGGTG GCTGCTCTTG CTCATGTGGC
ATCAATCCGG TGACAGGTAA GCCGAGAGGG ACGCTTCAAA AACTGGCGCA GAAAATCCGC
GAGGCTGGAA AGTTTAAGCC CGCCGTAAAC CAAAGAACGA TTGCAGTTGG TCAGGACGAG
TCTGGCGGCT TGTTTGCAGG CAGTAGCAAC GGTTTTGATG CAGGTCAACG AGAAATGGCC
GATAGTCTTG GAATAAAGAG GGTTCCTACT TCTAAGAATA AGCATGCGGA AGAGAATTTG
ATGAATTGCG TTCTGGGATT AAAATCAGTT GGAACGTCAA AGCGTGATCC TTGTGGACCT
TCAGAGCATA ATTGCGCCGG CCAGCTTGCC GACAAAGGTA TTGATGTCGA CAACTTACAT
TAA
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| Protein sequence | MTAAGVLQPK PTDVFVSPIM KITEADVQAG IDVFDKWLIK VSGGVVNVGR LKTVAENVPV
LANIFAAVDA VLDIKAMIEH GDEPIDMFDW VNLGLDLIGV VPLPPATAEL RLGARPVLKL
IRQEIVKSGK AVGEAALQVL RDSVISAIVA NVQERYAGEI EKFLKVIRDG LKELLEHCAK
FIGDLMKAIA DVFAHAAGKK YEVGHNVKSA GSHLKGVGEA IVAYDGRKIL DNFGGFLSDI
RKVEGKVVIN TATSAADLIT PNSTKKLQLF ADDIYKRIPT VQKCIRELDG NDAGKIGWII
TIGEDGMRSW RKSHPKPQSA GIQEHKTAKV KETRPEHRID EVQKTTEAHH PGPSCCPTHT
PVKTPPAATL NSIGFALGDE QINHEDFTID GPLPIAWART YRSFFDANDE QGELGARWIT
PYTTRFDIAA EKLVYHDAAG RSIEYPLLGV GSAHDDLSEG QTLLRLDEQW LTVTRGHTLL
EAYERHGNVF RLAFVKDRAG NQVTLDYDTE GRLHRLIASH VQVAFRHDVR GRIVGITHHD
AQGEYVGTLA SYEYDDQNDL IGATDRYGNR REYRYRHHLV TRYTDRTGRG VNLEWNGDGP
KAKCFREYAD DGSDEVRLAW HPDFRMVSVT DALGNVTHHY YDSKGYSFRV IHPDGSEEWM
YRDANDKLVQ YIHRDGTVEQ MEYDVRGNFV RHQRTDGSVV EMAYDQKDQL VRVTDPLGHP
WLREYDDAGN MVAEVDPLGH KTEYAYDGRG LLTRIKDAKG GVKALKYDDV GQLTGYTDCS
GKTSQWAYDA QGRLSEAKDA AGGVTAYRYG ANGQLIEVVS PAGREQLSYD AEGRLLTHID
PLNRNTRYGY DASGRINIRT DALGQSLSYR YDRLGRIVGL TNQNHANYSF RYDVAGRMIE
EIDFDGKATR YSYDEASSRL ESVDEAGQVM TMSHDRGGRL NGRSVGEEAE RFSYDPLGRL
IEASNRYSRV QRFFDPAGNL VREHHAYDLF GSSRSFVWHH RYDEIGNRIG TVRPDGHAVD
WLTYGSGHVH GLMLDGKELV QIERDDLHRE TLRTLPSKID QHTAYDRAGR LAQRTVQRAN
APAPLAERRY RYDAAGQLVQ IEDNRRGLTD YRYDPVGRLL ESIGPAGKER FAFDPASNII
DPVRVEAPRT ESRPSPVRAT ESTLPAEVPK VLGNLLKQYA GEHFAYDARG NLVHRRSPAG
EQRYEWNAFN RMTAATVDEV ARRSESRYYY DALGRRIAKE VNGERTVFGW DGDTLAYESG
EQGSTHYLYE AGSFVPMVQY ASASVDGFET PSRRETDRYV PEDDPLQRLP ERVGDAHAFY
YHCDQIGTPQ LLTDDEGDVV WEASYKAWGE AREVIARASK VAGIVPRSSL RFQGQQVDDE
TGLHYNRHRY YDPRSGRFVS KDPIGLAGGI NVYQYAPNPV KWVDPLGLSK SEGGCSCSCG
INPVTGKPRG TLQKLAQKIR EAGKFKPAVN QRTIAVGQDE SGGLFAGSSN GFDAGQREMA
DSLGIKRVPT SKNKHAEENL MNCVLGLKSV GTSKRDPCGP SEHNCAGQLA DKGIDVDNLH
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