| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3549 |
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| Symbol | |
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| ID | 3748727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | + |
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| Start bp | 410920 |
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| End bp | 414144 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637761824 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_367795 |
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| Protein GI | 78065026 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.321828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTGC CATCCGAGGG CGCGTCAAAA GAAAAAAGGC CGTTCATGAA CATGCAGAAC
ACAATCGCCG CCTTGAGCGG CGGATTGCTT CAGCAGGACC GGTTGCTGAA GCTCGATACG
CCATTGGGTG CCAACGTCCT GACCGTTCAG CGGGCGGTCG GCCGCTCGCG TATCGGGCGC
GCGTACGAGT TCACGCTCGA CGTGCTGTCG ACCGACAGCG ATGTGGAACT TAAAAAGCTG
ATCGCACAGC CGGTGACGTT GTGGATCCAG CAGGGCGATC TCGGCTACCG GCCAGTCAAC
GGATATGTGC ATACCGCACG CCGGCTGGGC GCCGACGGCG GGCTCACGAC CTATCAGCTC
GCGTTCGCGG ATTTCACCCA TTTCCTGAAG TTCCGTCGCG ATCAGCGGCT CTGGAACGAC
ACGACCGTCG ACCAGATCAT CAGCGATGTG CTGAACCAGC ATCCGCAGGC CCAGGGCCAT
TTCCGCTTTG CGCTGACGAA GCCGCTGCCG AACCGCTCCT ACACACGCCA GCACGACACC
GACTGGCATT TCGTGCATCG GCTGATGGAG AGCGAGGGGC TCTACTGCGC ATGGCAGCAG
GCCGACGACG GCAAGTCGCA TACGCTCGTC ATCACCGACA ACCTGCAGGC GTTCGCGCCG
CTGTCGCCGG AAGCCGTGCG CTTTTATCGC GGCGGCGCGG CCAGCGAAGC CGACGCGTTC
ACGCAATGGT CGGGTACGCG CATGCTGCAG AGCGTGACCC GCACGACGCG CACGTTCGAC
TACAAGAATC CTTCGCAGCC GTCGAACCCG AAAGGCACGT CGCTGCCGAC GATGGGCGGC
CAGGGCGAGT TGCCGGATCA ACTCGAAGTC TACGAGTACA CGGGCGGCTA CACGTATCTC
GACCAGACGC GCGGTGACCA TCTGACGAAG GTCAAGATGG AGGCGTGGGA GTCGCAAGCG
AAGCGTTTCC ATGGCGCGGG CGGCGTGCGT GCGATCGATG CCGGCCGGCG CTTCACGCTG
GCCGATCATC CCGAGCACGA TCGTGATCCC GCCGATCAGC GCGAGTTCGC CGCGATCGAG
GTCGCGTGGT GGATCGAGAA CAATCTGCCC GTCGCAAGCG ACAGCGCGGA CTTTCCGTAC
AGCCTGCGCG AAGCGTTGAC GCAGGCACAG GACAACTACG GCGCCGATCC TGCGTTTCGC
GTTCAGCACG ACGACGGTTC GGCCGGCTTC TATCTCGTCG AAGTCGAAGC GCAACGTGTG
AGCGTCCCGT ATCGCAGCCC GTTCGAGCAT CACAAGCCGG AGATGCACCT CGAGACCGCG
ATCGTCGTCG GGCCGCAGGG CGAGGAAGTC TATACCGACA CCCTGAACCG GATCCGCGTG
CAGTTCGTGT GGGACCGGAT GAACCCGGGT AACGAGAATG CATCGTGCTG GGTGCGCGTC
GTGCAGTCGG ATACGGGCGG TGGCTACGGC GGCGTGCACG TGCCGCGCAT CGGCGAGGAG
GTGCTGATCG ACTACGTCGG CGGCGACTGC GACCGGCCGC TCGCGGTCGG GCGCGTGTAC
AACGGCGCGA ACCAGCCGCA GTGGCATACC GACGGGATCC TGTCCGGGTA TCGGTCGAAA
GAGTATTCGG GCAGCGGCTA CAACCAGCTC GTGATGGACG ACGCGACCGG GCAAAACCGC
GTGCAGCTGA TGAGCAGCAG CGCGAACAGC CTGCTGCATC TCGGCTACCT CATCGATCAC
AACGCCAATT CGCGCGGGTC GTATCTCGGC AGCGGGTTCG ACCTGCGTTC CGATGCGTAT
GGTGCGGTGC GGGCGAGCCA GGGCCTGTAC GTGACGACGC ACCCGAAGGC AGCGAACAGC
CAGCCGCTCG ACGTGAGGGA AGCGCAGCAG CAGCTCGTGA CGGGCGAGAC CCTCGTCGAG
GCGATGTCGG GCGCGAGCGA GCAGCATCAG GCGGAAAGCC TGAAGGACGC GCAGGACACG
ATGCGCGCGT TCACGGACGC GACACAGGAC AGCGCATCGG GCAGCGCGTC CGGCGGGCGT
ACGGCAGGCG GCGGCACGGG TAACGCGAAC GCATTCAAGG AGCCGGTGAT GCTGTTCGGC
AGCCCGTCGG GGATCGGGAT GTCGACGCAG CAGTCGGTGC ACGTGGTCGC GAACGATCAC
GTGAACGTGG CGAGCGGGCA GAGCGTGCAC GTTGCCGCAG GCAAGTCGCT GATCGGGAGC
ATCGGGCAGA AGCTGAGCCT GTTCGTGCAG AACGCGGGGA TGAAGCTGTT CGCGGGCAAG
GGCAAGGTGG AGATCCAGGC GCAGTCGGAC AACGTCGAGG TGACCGCGCA GAAGACGGTG
AAGGTGGTGT CGTCGACGGA CCGGATCGAG ATCGCGGCCG ATCAGGGGAT TCTGCTGACG
AGCGGCGGCG GGTATGTCCG CATCCAGGGC GGGAATATCG AGATCCATAC GCCGGGGGCG
GTGGATGTGA AGGGCGCGTC GCATACGTTC GCGGGGCCGG CGAGCATGGG GTATCCGTTG
CCGAGCCCGC GGCCGGATCA GCCGGGGCAG TTGGAGTTGT TGCATACGTA CGGGAACGGC
CAGCCGGTGA AGGGCGGCTT GTTCTCGGTG TTCGATGCGA ATGGCGGGCT GTTGAAGAAA
GGGGCGCTCG ACAACAACGG GCACATGATC GTGAGTGGCC TGCCACCGGG GGCGGTGCAG
GTGAAGTTCG GGGAGGATCC GCGCTCGCAG GATCAACAGG CGAGCCGGTT CGATGTGGCG
CCGTGGCCGG CCAATCCGGC GCCGGCGGCA GGCGCCGCGG AAACCGCACA GGCGCAGCTC
GGTTCGTTTC TGCCGGCAGC GGGTGGTGCA GCCGGCGCGC TGACGGGCCT GGCCGGTGCG
GCGACGCAGG GTGGAGCGGC GCTGGCGAAG GCCGCCGTTG GTCAAGGCAT GGGCATGGCG
CAGCAGGCGC TGGTCGGCAT GCTGCCGGCC GGCGCGTCGA ATGCACTGGG TGCGGCGAAA
ACGGTCGCGG GATTGGCGAG CTCGGCGTCG CAGGGCGGTG CTGCCCTTGC GAAGGCAGTG
GCAGGCCAGG GCCTCGGTAT CGCGCAGCAG GCTGCGGCCA ACATGCTGCC GGCGGGGGCG
CAGGCGGCGC TGTCGCACGC GGGCCAGTTG AGTGCCGCCG CGCAGCAGGT CAGCGGTCTC
GCGCAGACGG CGCGTAGCGC CGCCGCCGCG CTGAAAATGA GCTGA
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| Protein sequence | MLVPSEGASK EKRPFMNMQN TIAALSGGLL QQDRLLKLDT PLGANVLTVQ RAVGRSRIGR
AYEFTLDVLS TDSDVELKKL IAQPVTLWIQ QGDLGYRPVN GYVHTARRLG ADGGLTTYQL
AFADFTHFLK FRRDQRLWND TTVDQIISDV LNQHPQAQGH FRFALTKPLP NRSYTRQHDT
DWHFVHRLME SEGLYCAWQQ ADDGKSHTLV ITDNLQAFAP LSPEAVRFYR GGAASEADAF
TQWSGTRMLQ SVTRTTRTFD YKNPSQPSNP KGTSLPTMGG QGELPDQLEV YEYTGGYTYL
DQTRGDHLTK VKMEAWESQA KRFHGAGGVR AIDAGRRFTL ADHPEHDRDP ADQREFAAIE
VAWWIENNLP VASDSADFPY SLREALTQAQ DNYGADPAFR VQHDDGSAGF YLVEVEAQRV
SVPYRSPFEH HKPEMHLETA IVVGPQGEEV YTDTLNRIRV QFVWDRMNPG NENASCWVRV
VQSDTGGGYG GVHVPRIGEE VLIDYVGGDC DRPLAVGRVY NGANQPQWHT DGILSGYRSK
EYSGSGYNQL VMDDATGQNR VQLMSSSANS LLHLGYLIDH NANSRGSYLG SGFDLRSDAY
GAVRASQGLY VTTHPKAANS QPLDVREAQQ QLVTGETLVE AMSGASEQHQ AESLKDAQDT
MRAFTDATQD SASGSASGGR TAGGGTGNAN AFKEPVMLFG SPSGIGMSTQ QSVHVVANDH
VNVASGQSVH VAAGKSLIGS IGQKLSLFVQ NAGMKLFAGK GKVEIQAQSD NVEVTAQKTV
KVVSSTDRIE IAADQGILLT SGGGYVRIQG GNIEIHTPGA VDVKGASHTF AGPASMGYPL
PSPRPDQPGQ LELLHTYGNG QPVKGGLFSV FDANGGLLKK GALDNNGHMI VSGLPPGAVQ
VKFGEDPRSQ DQQASRFDVA PWPANPAPAA GAAETAQAQL GSFLPAAGGA AGALTGLAGA
ATQGGAALAK AAVGQGMGMA QQALVGMLPA GASNALGAAK TVAGLASSAS QGGAALAKAV
AGQGLGIAQQ AAANMLPAGA QAALSHAGQL SAAAQQVSGL AQTARSAAAA LKMS
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