| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3439 |
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| Symbol | rpoB |
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| ID | 3748616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | + |
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| Start bp | 306419 |
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| End bp | 310525 |
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| Gene Length | 4107 bp |
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| Protein Length | 1368 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637761713 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_367685 |
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| Protein GI | 78064916 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.39818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATT CCTTCACCGA GAAGAAGCGC ATTCGCAAGA GTTTCGCGAA GCGCCCCATC
GTTCACCAAG TTCCTTTCTT GCTGGCTACC CAGCTTGAAT CATTCAGCAC GTTTCTGCAA
GCCGATGTGC TCGCGGCGCA ACGCAAGCCC GAAGGTTTGC AGGCCGCGTT CACGTCGGTA
TTTCCCATTG TTTCGCACAA CGGCTTCGCT CGCCTCGAGT TCGTGAGCTA CGCGCTGTCC
GCGCCGGCAT TCAACATCAA GGAATGCCAG CAGCGCGGCC TGACGTACTG CTCCGCACTG
CGCGCGAAGG TCCGCCTTGT CATCCTCGAC AAGGAATCGC CGAACAAGCC GGTCGTCAAG
GAAGTGAAAG AGCAGGAAGT GTACATGGGC GAAATGCCGC TCATGACGCC GACGGGCTCG
TTCGTCATCA ACGGCACCGA GCGTGTCATC GTCTCGCAGC TGCACCGTTC GCCGGGCGTG
TTCTTCGAAC ACGACAAGGG CAAGACGCAC AGCTCGGGCA AGCTGCTGTT CTCGGCACGG
ATCATTCCGT ATCGCGGCTC GTGGCTCGAC TTCGAATTCG ACCCGAAGGA CATCCTGTAC
TTCCGCGTCG ACCGTCGCCG CAAGATGCCG GTCACGATCC TGCTGAAGGC CATCGGCCTG
ACACCGGAAC AGATCCTCGC GAACTTCTTC GTGTTCGACA ACTTCACGCT GATGGACGAA
GGCGCGCAAC TCGAGTTCGT GCCCGAGCGC CTGCGTGGTG AAGTCGCGCG TTTCGACATC
ACGGATCGTG ATGGCAAGGT CATCGTCCAG AAGGACAAGC GGATCAACGC GAAGCACATT
CGCGACCTCG AAGCCGCGAA GACCAAGTTC ATCTCGGTGC CGGAAGACTA TTTGCTCGGC
CGCGTGCTGG CGAAGAACGT CGTCGACGGT GACACCGGCG AAGTGATCGC GAGCGCGAAC
GACGAAGTCA CGGAAAGCGT GCTCGAGAAG CTGCGCGAAG CGGGCATCAA GGACATCCAG
ACGCTCTACA CGAACGACCT GGACCAGGGC CCGTACATTT CGTCGACGCT GCGTGTCGAC
GAAACGACCG ACAGGACGGC TGCGCGCATC GCGATCTACC GCATGATGCG TCCGGGCGAG
CCGCCGACCG AAGAAGCGGT CGAGGCACTG TTCAACCGTC TGTTCTATAG CGAAGAAGCG
TACGACCTGT CGAAGGTCGG CCGTATGAAG TTCAACCGCC GCGTCAGCCG TGACGAGATC
ACCGGCCCGA TGACGCTGCA GGACGACGAC ATCCTCGCGA CGATCAAGAT CCTCGTCGAG
CTGCGCAACG GCAAGGGCGA AGTGGACGAC ATCGACCACC TCGGCAACCG TCGCGTGCGT
TGCGTCGGCG AACTGGCGGA AAACCAGTTC CGCGCAGGTC TCGTGCGTGT CGAGCGCGCG
GTCAAGGAAC GCCTCGGCCA GGCCGAAAGC GAAAACCTGA TGCCGCACGA CCTGATCAAC
TCGAAGCCGA TTTCGTCGGC GATTCGCGAG TTCTTCGGTT CGTCGCAGCT GTCGCAGTTC
ATGGACCAGA CCAACCCGCT GTCGGAAATC ACGCACAAGC GCCGTGTTTC CGCACTGGGC
CCGGGCGGTC TGACGCGCGA ACGCGCAGGC TTCGAAGTCC GCGACGTGCA CCCGACCCAC
TATGGCCGCG TGTGCCCGAT CGAAACGCCG GAAGGTCCGA ACATCGGCCT GATCAACTCG
CTCGCACTGT ATGCGCACCT GAACGAGTAT GGCTTCCTCG AGACGCCGTA CCGCAAGGTC
GTGGACAGCA AGGTGACCGA CCAGATCGAC TACCTGTCGG CGATCGAAGA AGGCCGCTAC
ATGATCGCTC AGGCGAACGC CGCGATCGAC GAGAACGGCC AGCTGATCGA CGAACTCGTG
TCGTCGCGTG AAGCCGGCGA AACGATGATG GTCACGCCGG ACCGTATCCA GTACATGGAC
GTCGCGCCGT CGCAGATCGT GTCGGTGGCA GCTTCGCTGA TTCCGTTCCT TGAACACGAT
GACGCGAACC GTGCACTGAT GGGTTCGAAC ATGCAGCGTC AGGCCGTGCC GTGTCTGCGT
CCGGAAAAGC CGGTCGTCGG TACGGGCATC GAGCGCACCT GCGCGGTCGA CTCGGGTACG
ACGGTTCAGG CGTTCCGCGG TGGCGTCGTC GATTATGTCG ACGCAGGCCG TATCGTGATT
CGCGTGAACG ACGACGAAGC AGTCGCAGGT GAAGTCGGTG TCGACATCTA CAACCTGATC
AAGTACACGC GTTCGAACCA GAACACGAAC ATCAACCAGC GTCCGATCGT GAAGATGGGC
GACAAGGTCT CGCGCGGCGA CGTGCTGGCC GACGGCGCCT CGACGGACCT GGGCGAGCTC
GCGCTCGGCC AGAACATGCT GATCGCGTTC ATGCCGTGGA ACGGCTACAA CTTCGAGGAT
TCGATCCTGA TCTCGGAGAA GGTCGTTGCA GACGATCGCT ACACGTCGAT CCACATCGAA
GAGCTGAACG TCGTTGCACG CGACACGAAG CTCGGGCCGG AAGAAATCAC GCGCGACATC
TCGAACCTGG CAGAAGTCCA GCTCGGCCGT CTCGACGAAT CGGGCATCGT GTACATCGGT
GCTGAAGTCG AAGCAGGCGA CGTGCTGGTC GGCAAGGTCA CGCCGAAGGG CGAGACCCAG
CTGACGCCGG AAGAGAAGCT GCTGCGCGCG ATCTTCGGCG AGAAGGCTTC GGACGTGAAG
GACACGTCGC TGCGCGTGCC GTCGGGCATG AGCGGCACCG TGATCGACGT CCAGGTGTTC
ACGCGTGAAG GCATCCAGCG CGACAAGCGT GCGCAACAGA TCATCGACGA TGAACTGAAG
CGTTACCGTC TCGACCTGAA CGACCAGCTG CGCATCGTGG AAGGCGACGC GTTCCAGCGT
CTCGCACGCA TGCTCGTGGG CAAGGTCGCG AACGGTGGTC CGAAGAAGCT CGCGAAGGGT
ACGAAGATCG ACCAGGCTTA CCTGGAAGAC CTCGACCACT ACCACTGGTT CGACATCCGC
CTCGCGGACG ACGAAGCAGC GGCGCAGCTC GAAGCGATCA AGAACTCGAT CGAAGAAAAG
CGTCACCAGT TCGACCTCGC GTTCGAAGAG AAGCGCAAGA AGCTCACGCA AGGCGACGAA
CTGCCGCCGG GCGTGCTGAA GATGGTCAAG GTGTACCTCG CGGTCAAGCG TCGCCTGCAG
CCTGGCGACA AGATGGCAGG CCGTCACGGT AACAAGGGTG TCGTGTCGAA GATCGTCCCG
ATCGAAGACA TGCCGTACAT GGCCGATGGC CGTCCGGCAG ACGTCGTGCT GAACCCGCTG
GGCGTTCCGT CGCGGATGAA CGTGGGTCAG GTTCTGGAAG TGCACCTCGG CTGGGCCGCG
AAGGGTCTCG GCTGGCGTAT CGGCGAAATG CTGCAGCGTC AGGCGAAGAT CGAGGAAATG
CGCGTGTTCC TGACGAAGAT CTACAACGAC TCGGGCCGCC AGGAAGACCT GGAAAGCTTC
ACCGACGAAG AGATCCTCGA ACTCGCGAAG AACCTGCGCG AAGGCGTGCC GTTCGCAACG
CCGGTGTTTG ACGGTGCGAC CGAGGAAGAA ATGGGCAAGA TGCTCGACCT CGCGTTCCCG
GACGACATCG CTGAACAGCT CGGCATGAAC CCGTCGAAGA ACCAGGTCCG TCTGTACGAC
GGCCGCACGG GTGAAATGTT CGAACGTCGC GTGACGCTTG GCTACATGCA CTACCTGAAG
CTGCACCACT TGGTCGACGA CAAGATGCAC GCGCGTTCGA CCGGTCCGTA CTCGCTCGTC
ACGCAGCAGC CGCTGGGTGG TAAGGCGCAG TTCGGTGGCC AGCGTTTCGG TGAAATGGAA
GTGTGGGCAC TCGAAGCGTA CGGCGCGTCC TACGTGCTGC AGGAAATGCT GACGGTGAAG
TCGGACGACG TGAACGGCCG TACCAAGGTT TATGAAAACC TGGTCAAGGG CGATCACGTG
ATCGATGCAG GCATGCCGGA ATCCTTCAAC GTGCTCGTGA AGGAAATCCG CTCGCTCGGT
ATCGACATCG ATCTCGACCG CAATTAA
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| Protein sequence | MQYSFTEKKR IRKSFAKRPI VHQVPFLLAT QLESFSTFLQ ADVLAAQRKP EGLQAAFTSV
FPIVSHNGFA RLEFVSYALS APAFNIKECQ QRGLTYCSAL RAKVRLVILD KESPNKPVVK
EVKEQEVYMG EMPLMTPTGS FVINGTERVI VSQLHRSPGV FFEHDKGKTH SSGKLLFSAR
IIPYRGSWLD FEFDPKDILY FRVDRRRKMP VTILLKAIGL TPEQILANFF VFDNFTLMDE
GAQLEFVPER LRGEVARFDI TDRDGKVIVQ KDKRINAKHI RDLEAAKTKF ISVPEDYLLG
RVLAKNVVDG DTGEVIASAN DEVTESVLEK LREAGIKDIQ TLYTNDLDQG PYISSTLRVD
ETTDRTAARI AIYRMMRPGE PPTEEAVEAL FNRLFYSEEA YDLSKVGRMK FNRRVSRDEI
TGPMTLQDDD ILATIKILVE LRNGKGEVDD IDHLGNRRVR CVGELAENQF RAGLVRVERA
VKERLGQAES ENLMPHDLIN SKPISSAIRE FFGSSQLSQF MDQTNPLSEI THKRRVSALG
PGGLTRERAG FEVRDVHPTH YGRVCPIETP EGPNIGLINS LALYAHLNEY GFLETPYRKV
VDSKVTDQID YLSAIEEGRY MIAQANAAID ENGQLIDELV SSREAGETMM VTPDRIQYMD
VAPSQIVSVA ASLIPFLEHD DANRALMGSN MQRQAVPCLR PEKPVVGTGI ERTCAVDSGT
TVQAFRGGVV DYVDAGRIVI RVNDDEAVAG EVGVDIYNLI KYTRSNQNTN INQRPIVKMG
DKVSRGDVLA DGASTDLGEL ALGQNMLIAF MPWNGYNFED SILISEKVVA DDRYTSIHIE
ELNVVARDTK LGPEEITRDI SNLAEVQLGR LDESGIVYIG AEVEAGDVLV GKVTPKGETQ
LTPEEKLLRA IFGEKASDVK DTSLRVPSGM SGTVIDVQVF TREGIQRDKR AQQIIDDELK
RYRLDLNDQL RIVEGDAFQR LARMLVGKVA NGGPKKLAKG TKIDQAYLED LDHYHWFDIR
LADDEAAAQL EAIKNSIEEK RHQFDLAFEE KRKKLTQGDE LPPGVLKMVK VYLAVKRRLQ
PGDKMAGRHG NKGVVSKIVP IEDMPYMADG RPADVVLNPL GVPSRMNVGQ VLEVHLGWAA
KGLGWRIGEM LQRQAKIEEM RVFLTKIYND SGRQEDLESF TDEEILELAK NLREGVPFAT
PVFDGATEEE MGKMLDLAFP DDIAEQLGMN PSKNQVRLYD GRTGEMFERR VTLGYMHYLK
LHHLVDDKMH ARSTGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAS YVLQEMLTVK
SDDVNGRTKV YENLVKGDHV IDAGMPESFN VLVKEIRSLG IDIDLDRN
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