| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3403 |
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| Symbol | |
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| ID | 3748571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | - |
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| Start bp | 261542 |
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| End bp | 262747 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637761668 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_367649 |
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| Protein GI | 78064880 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00376035 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.420161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGATC ACAATCTGGA CAAACTGAAG ATCGACCGGC GTCCGCTCGC ACCGGCACCC
CGCCGGCGCC GGTGGCTCCG CTATGCGGTC GCCGCCGCGG TCGTCATCGG CGCGATCGTC
GCCGGCCTCG CGCTCACCGG CCGGCCGGCC GTCGAAACCA CCGCCGTCAC GTCCGCCTAC
CCGTACCAGA ACGACACGCA GCTCAATGCG ACCGGCTACG TCGTGCCGCA GCGCAAGGCC
GCGGTCGCGT CGAAGGGCCA GGGACGCGTC GAATGGCTCG GCGTGCTCGA AGGCACGCGC
GTGAAGAAAG ATGAGATCAT CGCCCGCCTC GAAAGCCGTG ACGTCGAGGC CTCGCTGGCA
CAGGCGCTCG CACAGGTGAA GGTCGCCCGC GCCAACCTCG GCGTCGAGCA GGCCGAACTG
AAGGACGCCG AGATCGCGTT GCGCCGCACC TCGGTGCTCG CGCCCAAGGG CGCCGTGCCG
GCCGCGCAGC TCGACACCGA CACGGCCCGC GTGAACAAGG CGCGCGCGTC GGTCAACAGC
GACCAGGCCG CCATCACGTC CGCCGAAGCC AACGCGCAAG CCGCGCAGGT CGCGGTCGAC
CAGACGGTGA TCCGCGCCCC GTTCGACGGC ATCGTGCTCG CGAAGCACGC GAACGTCGGC
GACAACATCA CGCCGTTCTC GTCCGCATCG GACAGCAAGG GTGCGGTCGT GACGATTGCC
GACATGGACA CGCTCGAGGT CGAGGCCGAC GTCGCCGAAT CGAACATCGC GAAGATCCGC
GCCGAGCAGC CGTGCGAGAT CCAGCTCGAC GCGCTGCCCG ACACGCGCTT CGCGGGCCGC
GTGTCGCGCA TCGTGCCGAC CGTCGACCGC TCGAAGGCCA CCGTGCTCGT GAAAGTACGC
TTCGTCGACC GCGACGACCG CGTGCTGCCC GACATGAGCG CGAAGATCGC GTTCCTGTCG
AAGCCCGCGT CGGCGCAGGA CCGGCAGCCC GTGACGGCCG TGCAGGCAAG CGCGGTCGTG
GAACGCGACG GCCGGCCGGT CGTGTTCGTC GTGAAGGACG ACACCGTGCG CGCCGTGGGC
GTGACGCGGG GCGAGCGGAT CGGCGAACTC ATCGCGATCC GCGGCGTGAA GCCCGGCGAC
ACGGTCGTGC TCGCGCCGGA CGCGAAGCTG AAGGACGGCG CGAAAGTGAC CGTCGCGAAG
AAGTAG
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| Protein sequence | MPDHNLDKLK IDRRPLAPAP RRRRWLRYAV AAAVVIGAIV AGLALTGRPA VETTAVTSAY
PYQNDTQLNA TGYVVPQRKA AVASKGQGRV EWLGVLEGTR VKKDEIIARL ESRDVEASLA
QALAQVKVAR ANLGVEQAEL KDAEIALRRT SVLAPKGAVP AAQLDTDTAR VNKARASVNS
DQAAITSAEA NAQAAQVAVD QTVIRAPFDG IVLAKHANVG DNITPFSSAS DSKGAVVTIA
DMDTLEVEAD VAESNIAKIR AEQPCEIQLD ALPDTRFAGR VSRIVPTVDR SKATVLVKVR
FVDRDDRVLP DMSAKIAFLS KPASAQDRQP VTAVQASAVV ERDGRPVVFV VKDDTVRAVG
VTRGERIGEL IAIRGVKPGD TVVLAPDAKL KDGAKVTVAK K
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