| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3340 |
|---|
| Symbol | |
|---|
| ID | 3748507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 194726 |
|---|
| End bp | 197212 |
|---|
| Gene Length | 2487 bp |
|---|
| Protein Length | 828 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637761604 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_367586 |
|---|
| Protein GI | 78064817 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.710571 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA TTCAAGACAC GCTGCAGTCC GCGCTGGCGC ATCATCAGGC GGGCCGTCTC
GCCGAAGCGA AGACGCTGTA CGACGCGATC CTCACCGCGC AGCCGGGCCA GCCGGATGCG
CTGCATTTCC TCGGGCTGCT GGCGTGTCAG CTGAAGCAGT ACGACGCGGG CATCGCGCTG
ATGGAGCAAT CGCTCGTCGC GCGGCCGGAC GCGTCGTACT TCAACAACCT GGGCAACATG
CTGCGCGAAA GCGGCCGGCT CGACGACGCG ATCGCGCACT ACCGTCGCGC GGTGGGGCTG
CGGCCGGACT ATCCGGAGGC GCACAACAAT CTCGGCAACG CGTTGCGCGA CGCGCGCGAG
CCGACGGCTG CGATGGAGAG CTGCGCGCGT GCGATCGAGC TGCGGCCCGG CTATGCGGAG
GCGTACAACA ACCTCGGCAA CGCGCTGCAG GATCTGGGCG AGCACGAGGC GGCGGCGGCG
AGCTACGCCA AGGCGGTCGC GCACCAGCCG CAATACGCGG ATGCGTACTG CAATCTCGGC
AACGCGCTGA ATGCGCAGGA GAAATTCGAC GATGCCGCGG ATGCCTATCG TCGCGCCATC
GCGCTGCAAC CGGGCTTCCG TGTCGCGCAC CAGGGGCTGA GCGAGACGCT GCGCGCGGCA
GGTGATCTGC GGGGTGCGGT CGACCATGCG CGCGAGGGAC TCGATCCGGG CGACGCGGAC
GCGCACTGCG TATTGGCCAG GCTCCTGCAG CGCATGAGCG AGTTCGACAA GGCGGTCGAA
CTGCTCGAGC GGGCGATCGC GATCGATCCC GCGCATGCAC GGGCGTGGGC CTGGCTCGGC
GACCTGCGCA ACCAGCAGGG CGAATACGGT CAGGCTGTGC AGGCGTGCCG GCACGCGATC
GAGCTCGATC CCGAACTGGC CGATGCGTAC AATTTCCTCG GCTTCGCGTA TCACAACCTC
AATCGGCTGG CTGCGGCGGA GCTGAGCTAC CGGCACGCGA TCGACCTGAA CCCCGACGAT
GCCGACGCCC ATCAGAACCT CGCCGCCGCG CTGTTGCGGC TCGAGAAGCT CGACGAGGCG
CTGAAGCACA CCGAGATCGC GCGGGAACTC GGCATCGATC CGCTGAAGCT CCAGATGACG
CTCGGCGACA TCCTGTGGGC AAAAGGGGAT CTCGCCGGCG CGCTGGACGC ATTCCGCACG
GCGATCCGGT ACGACCTTCA TCGCGCGTAC TCGCGGATGC TGTTCAACAT GTCGAGTTCG
CCCGCGTTCG AGCCGCAGGA GTGGGTCGCT GAAGCGCGCC GCTATGGCGA ACATCTCGAG
CGCGACGCGC ATCCGTTCGA GCACGACCGC GCGCAGCGCG TCGCGCGGGC GCAGGGGCGG
CCGCTGCGCG TCGGCTTCGT GTCGGGCGAC TTGCGGCAGC ACCCGGTCGG CATTTTCCTG
GAAAGCGTAC TGGCGCGGAT CGACCGGTCG CGCATCGAGC CACATGCCTA TGTGACGTTC
GTCGGCGAGG ACGACGTGAC CGCGCGGCTC AGGCCGAACT TCGCGAGCTG GAAGAAGGTG
GTCGGCCTGG GCCGCGAGGA GGCCGCGCAA CTGATTCGCG ACGACGGCAT CGATATCCTG
ATCGACATGG CAGGCCATAC CGACTGGAGC GGCCTGCCGA TTTTCGGGCA CAAGCCCGCG
CCGGTGCAGG CGAGCTGGCT CGGTTTCTTC GCGACGACCG GTTGCCGCGC GATCGACTAT
TTCATCGGCG ATGCGCATAC GCTACCCGCC GACGAGGCGC AACACTTCAC CGAGCGGCCG
TGGCGGCTGC CGGACAGCTA TCTGTGCTTC ACGCCGCCGC CGTACGATGT CGCGGTCGGC
CCGCTGCCGA TGGTGGCTCA TGGCGGCGTC ACGTTCGGCT GCTTCGGCAA GCTGATCAAG
ATCAGCGACG AGGTCGTCGC GCTGTGGTCG CGCATCCTGC ACGCGCTGCC GGACGCGCAC
CTGCTGCTGA AGGCCCATGA GCTCGGCGCC GACGACGTGA ACCAGGCGAC GCTCAACCGC
TTCGCGCGGC ATGGCATCGG CGCGGATCGG CTGATCCTCG AAGGCGGGTC GCCGCGTGCG
GAATACTTTG CCGCGTATAA CCGCATCGAC GTCGCGCTGA GCCCGTTTCC GTACCCGGGC
GGCACGACCA CCGCCGAAGC GCTGTGGATG GGCGTGCCGG TGCTCGGGAT GAAGGGCGGC
CGGTTCGTCA CGCACATTTG CGAAAGCGTG CTGCACGCGG CGGGCATGGG CGACTGGATC
GCGACGGACG AGGATGCGTA CCTGACGAAG GCCGTCGCGT TCGCCCGCGA TCGTGACCGG
CTGGCGACGT TGCGGGCAAC GCTGCGCGCG CAATTGCTCG CGTCGCCGCT GTGCGACGCG
TCGCGCTTCG CGCGCAACCT GGAGGATGCG CTGCACGGCA TGTGGGCCTG CTATGCGTCC
GGCGAGACGG CGCCCGGGGG CGCGTGA
|
|---|
| Protein sequence | MNDIQDTLQS ALAHHQAGRL AEAKTLYDAI LTAQPGQPDA LHFLGLLACQ LKQYDAGIAL
MEQSLVARPD ASYFNNLGNM LRESGRLDDA IAHYRRAVGL RPDYPEAHNN LGNALRDARE
PTAAMESCAR AIELRPGYAE AYNNLGNALQ DLGEHEAAAA SYAKAVAHQP QYADAYCNLG
NALNAQEKFD DAADAYRRAI ALQPGFRVAH QGLSETLRAA GDLRGAVDHA REGLDPGDAD
AHCVLARLLQ RMSEFDKAVE LLERAIAIDP AHARAWAWLG DLRNQQGEYG QAVQACRHAI
ELDPELADAY NFLGFAYHNL NRLAAAELSY RHAIDLNPDD ADAHQNLAAA LLRLEKLDEA
LKHTEIAREL GIDPLKLQMT LGDILWAKGD LAGALDAFRT AIRYDLHRAY SRMLFNMSSS
PAFEPQEWVA EARRYGEHLE RDAHPFEHDR AQRVARAQGR PLRVGFVSGD LRQHPVGIFL
ESVLARIDRS RIEPHAYVTF VGEDDVTARL RPNFASWKKV VGLGREEAAQ LIRDDGIDIL
IDMAGHTDWS GLPIFGHKPA PVQASWLGFF ATTGCRAIDY FIGDAHTLPA DEAQHFTERP
WRLPDSYLCF TPPPYDVAVG PLPMVAHGGV TFGCFGKLIK ISDEVVALWS RILHALPDAH
LLLKAHELGA DDVNQATLNR FARHGIGADR LILEGGSPRA EYFAAYNRID VALSPFPYPG
GTTTAEALWM GVPVLGMKGG RFVTHICESV LHAAGMGDWI ATDEDAYLTK AVAFARDRDR
LATLRATLRA QLLASPLCDA SRFARNLEDA LHGMWACYAS GETAPGGA
|
|---|
| |