| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3293 |
|---|
| Symbol | |
|---|
| ID | 3748459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 128342 |
|---|
| End bp | 130603 |
|---|
| Gene Length | 2262 bp |
|---|
| Protein Length | 753 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637761556 |
|---|
| Product | primosome assembly protein PriA |
|---|
| Protein accession | YP_367539 |
|---|
| Protein GI | 78064770 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.259169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA CCTATCTGCG CGTCGCGCTC GACCATCCGC TCGCCACCCT GTTCGATTAC
CGCTGCGACG CGCAACCGGT GCCCGGGCCC GGCACGCTCG TGCAGGTGCC GTTCGGCAAG
CGGCAGGCCG TCGGGCTCGT CTGCGAAGTG ACGACTCACA CCGATGTGCC GCCATCCCGG
CTGCGCGCAG TCGACGCGAT CTGCACCGAC CTGCCGCCGT TGTCGCCGGA CTGGCTCGCG
CTCGTGTCGT TCGCCGCCGA CTACTACCAG CGCGGCCGTG GCGAGGTCGC GCTGCCGGCG
CTGCCGCAGG CGCTGCGCGA TGCCGGCCGC TGGGGGCGGC TGCTCGCGCC CGAGGTGCGC
TACCGGCCGA CGGAAGCCGG CCGCGCGGCG CTGCCCGATG CATTGCCCGC GCGCGGGGCC
GCGCTGCGGC GGCTCGCGCA GGCCCTGGTC GACACCGATT CGCTGGCGCT GCCCGATGCG
CGCGCGCTGC ACCCGAAGGC GGCGGCGACG CTCGACGACT GGGCGGCGCG CGGCTGGGTC
GACGTCGAGG AGATCGGCTG GGCCGACGCG CCTGTGCCCA AAGCTGTGGA TAACCTGTTG
GCAGCCGGTG GACGAACTGT GCCGCCGGCG CTCACGGACC AGCAGGCCGA GGCGCTCGAC
GCGATTCGCG CCGCACAGGG CTTCGCGCCG TTCCTGCTGC ACGGCGTGAC GGGCAGCGGC
AAGACCGAGG TCTATCTGCA TGCGCTCGCA TCGCTGCTCG ATGCACGGCC GGACGCGCAA
GCGCTCGTGC TCGTCCCCGA AATCAACCTG ACGCCGCAGT TCGAGGCCGC GTTTCGCGCG
CGCTTCGCGG GGGCGCTCGC CGACGACGCG ATCGTCACGC TGCACAGCGG GCTCGCCGAG
GGCGAGCGTG CGCGCAACTG GCTCGCCGCG CATACGGGCC GCGCGCGGAT CGTGCTCGGC
ACGCGCCTCG CAGTGCTCGC GTCGATGCCG ACACTCGCGT TGATCGTCGT CGACGAGGAG
CACGAGCCCG CATACAAGCA GCAGGAAGGG CTGCGCTATT CGGCACGCGA TCTCGCCGTG
TGGCGCGCGA AGCAGCTCGG CATCACGGTC GTGCTCGGCT CGGCGACGCC GTCGCTCGAA
AGCTGGTGGC AGGCCGAGCA GGGCCGTTAC ACGCGGCTCA CGCTGTCGCG CCGCGCGGTG
GCTGACGCGA CGCTGCCGAC CGTGCGCCTG ATCGACCTCG AAGAGGAGCG GCGGCGCGGG
CGCGCGTCGA TGGGCGGGCT GTCGGGGCCG CTCGTCGCGG CGCTGAAGGC GCGGCTCGAG
CGCGGCGAAC AGAGCCTCGT GTTCCTGAAC CGGCGCGGTT ATGCGCCGCA GCTCGCGTGC
GACGCATGCG GCTGGGTTGC CGGCTGCCCG CGCTGCAGCG CGTACGTCGT GCTGCACAAG
CCCGAGCACG CGCTGCGCTG CCATCACTGC GGCTGGGAAT CGCGCATTCC GCGGTCGTGC
CCCGAATGCG GGAACGTCGA CATCGCGCCG CTCGGGCGCG GTACGCAACG GATCGAGGAG
GCGCTCGCCG AGACCGTGCC GGGTGCGCGC GTGCTGCGGA TCGACGCGGA CAGCACACGT
CGCAAGGGCA GTGCGCAGGC GCTCTTTTCC GACGTGCACG CGGGCGAGGT CGATATCCTC
GTCGGCACGC AGATGATCGC GAAGGGGCAC GACTTCCAGC GCGTGTCACT CGTCGGCGTG
CTCAATGCCG ATACTGCGCT GTTCTCGCAC GACTTCCGCG CGAGCGAACG GCTGTTCGCG
CAGCTGATGC AGGTGAGCGG CCGCGCAGGG CGCGCCGGGC TGCCGGGCGA GGTGCTCGTG
CAGACGCGTT ACCCGCGTCA TGCGCTGTAC CACGCGCTCG GGCGGCAGGA TTACGTCGGC
TTCGCGAATT CGACGCTTGG CGAGCGCCGC GACGCGCACC TGCCGCCGTT CGTCTACCAG
GCGCTGCTGC GCGCCGAAGG GCGCACGCTC GACGCGGCGC TCGCGTTCCT GCTGCAAGCC
GCGGCCGCGT TGCCGGGGCT GCCGGGTGCC GATCGCGTGA CCGTCTACGA CGCGGTGCCG
ATGACGATCG TCAAGGTCGC GAACGTCCAT CGCGCGCAGT TGCTGCTCGA AAGCGCGTCG
CGGGCGGCGC TGCAGCATGC GCTGCGCGCA TGGCAGCCGG AGCTGCGCGC GCTGAAGGGC
GTGCTGCGGT GGAGCGTCGA GGTCGATCCG CTGGATATCT GA
|
|---|
| Protein sequence | MSGTYLRVAL DHPLATLFDY RCDAQPVPGP GTLVQVPFGK RQAVGLVCEV TTHTDVPPSR
LRAVDAICTD LPPLSPDWLA LVSFAADYYQ RGRGEVALPA LPQALRDAGR WGRLLAPEVR
YRPTEAGRAA LPDALPARGA ALRRLAQALV DTDSLALPDA RALHPKAAAT LDDWAARGWV
DVEEIGWADA PVPKAVDNLL AAGGRTVPPA LTDQQAEALD AIRAAQGFAP FLLHGVTGSG
KTEVYLHALA SLLDARPDAQ ALVLVPEINL TPQFEAAFRA RFAGALADDA IVTLHSGLAE
GERARNWLAA HTGRARIVLG TRLAVLASMP TLALIVVDEE HEPAYKQQEG LRYSARDLAV
WRAKQLGITV VLGSATPSLE SWWQAEQGRY TRLTLSRRAV ADATLPTVRL IDLEEERRRG
RASMGGLSGP LVAALKARLE RGEQSLVFLN RRGYAPQLAC DACGWVAGCP RCSAYVVLHK
PEHALRCHHC GWESRIPRSC PECGNVDIAP LGRGTQRIEE ALAETVPGAR VLRIDADSTR
RKGSAQALFS DVHAGEVDIL VGTQMIAKGH DFQRVSLVGV LNADTALFSH DFRASERLFA
QLMQVSGRAG RAGLPGEVLV QTRYPRHALY HALGRQDYVG FANSTLGERR DAHLPPFVYQ
ALLRAEGRTL DAALAFLLQA AAALPGLPGA DRVTVYDAVP MTIVKVANVH RAQLLLESAS
RAALQHALRA WQPELRALKG VLRWSVEVDP LDI
|
|---|
| |