Gene Bcep18194_A3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3245 
Symbol 
ID3748391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp77484 
End bp77933 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content63% 
IMG OID637761508 
Productlytic transglycosylase 
Protein accessionYP_367491 
Protein GI78064722 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.432237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC GGTTCGTTTC GATCGCGTTG ATCGCCGCCG GCGGGTGTTT CGCCAGCGCG 
AACGCTCGCG CGGACTGTTT CGACGAGGCC GCTAAATATC AGCAGGTCAA TCCGCTGATC
CTGCGCGCGA TCGCGTGGCA GGAATCGCGC AACCGGCCCG GCGCGCTGAA CAAGAACACG
AACGGCTCGG TCGACTACGG CCTGATGCAG ATCAATTCGA TCCACCTGCC GACGCTGTCG
CGCTACGGGA TCGGCCGCGA CACGCTGATG GAGCCGTGCA AGAACGTGTA CATCGCCGCA
TGGCATCTCA AGCAGAAGAT GAACCGCTAC GGCAACACGT GGCAGGCGGT CGGCGCCTAT
CATTCGGAAA CCCCGTCGCT GCGCGACAAG TACGCGCGGC AGATCGCCGG CATCCTGACC
CAGTGGAAGC TGCTGCCGCC CGTGCAATGA
 
Protein sequence
MNRRFVSIAL IAAGGCFASA NARADCFDEA AKYQQVNPLI LRAIAWQESR NRPGALNKNT 
NGSVDYGLMQ INSIHLPTLS RYGIGRDTLM EPCKNVYIAA WHLKQKMNRY GNTWQAVGAY
HSETPSLRDK YARQIAGILT QWKLLPPVQ