Gene Bcep18194_A3242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3242 
Symbol 
ID3748388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp72053 
End bp73270 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content69% 
IMG OID637761505 
Productgeneral secretion pathway protein F 
Protein accessionYP_367488 
Protein GI78064719 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID[TIGR02120] general secretion pathway protein F 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.458785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCAT TCCGTTTCGA AGCAATCGAT TCGGCGGGAC GCGCGCAGAA AGGCGTCATC 
GACGCCGACA GCGCACGTGC CGCGCGCGGC CAGCTGCGTA CGCAGGGGCT GACGCCGCTC
GTCGTCGAGC CGGCAGCCAG CGCGACGCGC GGGGCGCGGT CGCAGCGGCT CGCGTTCGGC
CGCAAGCTGT CGCAGCGCGA ACAGGCGATC CTCACGCGCC AGCTCGCGAG CCTGCTGATC
GCCGGGCTGC CGCTCGACGA GGCGCTCGGC GTGCTGACCG AGCAGGCCGA GCGCGACTAC
ATCCGCGAAC TGATGGCCGC GATCCGCGCC GAGGTGCTCG GCGGCCATTC GCTCGCGAAT
GCGCTGGGCC AGCATCCGCG CGACTTCCCG GAAATCTACC GCGCGCTCGT CGCGGCGGGC
GAGCACACCG GCAAGCTCGG CATCGTGCTG TCGCGCCTCG CCGACTACAT CGAGCAGAGC
AACGCGCTGA AGCAGAAGAT CCTGCTGGCG TTCACGTATC CGGGGATCGT CACGCTGATC
GCATTCGGCA TCGTCACGTT CCTGCTGAGC TACGTCGTGC CGCAGGTCGT CAACGTGTTC
GCGAGCACGA AGCAGCAACT GCCCGTGCTG ACGATCGTGA TGATGGCGCT GTCGGATTTC
GTGCGGCACT GGTGGTGGGC GATCCTGATC GCGGTCGTGC TGATCGTGTG GTTCGTGAAG
GCGACGCTGT CGCGCGACGG GCCTCGCCTC GCGTTCGACC GCTGGGTGCT CACCGCGCCG
CTCGCGGGCA AGCTCGTGCG CGGCTACAAC ACGGTGCGCT TCGCGAGCAC GCTCGGCATC
CTCACCGCGG CGGGCGTGCC GATCCTGCGC GCGTTGCAGG CGGCCGGCGA GACGCTGTCG
AACCGTGCGA TGCGCGCGAA CATCGACGAC GCGATCGTGC GGGTGCGCGA AGGCTCCGCG
CTGTCGCGCG CGCTGAACAA CGTGAAGACG TTTCCGCCGG TGCTCGTGCA CCTGATCCGC
TCGGGTGAAG CGACGGGCGA CGTGACGACG ATGCTGGATC GCGCGGCCGA AGGTGAGGCG
CGCGAGCTCG AGCGCCGCAC GATGTTCCTG ACGAGCCTGC TCGAGCCGCT GCTGATCCTG
GCAATGGGGG GCATCGTGCT CGTGATCGTG CTGGCGGTGA TGCTGCCGAT CATCGAGCTG
AACAACATGG TGCAGTGA
 
Protein sequence
MPAFRFEAID SAGRAQKGVI DADSARAARG QLRTQGLTPL VVEPAASATR GARSQRLAFG 
RKLSQREQAI LTRQLASLLI AGLPLDEALG VLTEQAERDY IRELMAAIRA EVLGGHSLAN
ALGQHPRDFP EIYRALVAAG EHTGKLGIVL SRLADYIEQS NALKQKILLA FTYPGIVTLI
AFGIVTFLLS YVVPQVVNVF ASTKQQLPVL TIVMMALSDF VRHWWWAILI AVVLIVWFVK
ATLSRDGPRL AFDRWVLTAP LAGKLVRGYN TVRFASTLGI LTAAGVPILR ALQAAGETLS
NRAMRANIDD AIVRVREGSA LSRALNNVKT FPPVLVHLIR SGEATGDVTT MLDRAAEGEA
RELERRTMFL TSLLEPLLIL AMGGIVLVIV LAVMLPIIEL NNMVQ