Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A3237 |
Symbol | |
ID | 3748383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 69299 |
End bp | 69988 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637761500 |
Product | putative general secretion pathway protein J |
Protein accession | YP_367483 |
Protein GI | 78064714 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | [TIGR01711] general secretion pathway protein J [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.722967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.701162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAG CCGTCCGCTC TGACGCGCCG ATGCGACGCC CGCTCGCCCG CCCCGCTCGC GGCTTCACGC TGATCGAGCT GATGATCGCG ATCGCGATCC TCGCGGTGGT CGCGATCCTC GCGTGGCGCG GGCTCGACCA GATCATGCGC GGTCGCGACA AGGTCGCGGC CGCGATGGAA GACGAGCGCG TGTTCGCGCA GATGTTCGAC CAGATGCGCA TCGACGCGCG GCTCGCCGCG ACCGACGACG AGGCCGGCCA GCCGGCGATC GGCGTCGCCG GCAATACGTT GCAGATCGTC CGCGAACTCG AGGTGCCGGG CGTTGCGCCG CGGCTGCAGG TGGTGCGTTA CCGGATCGCC GTCGGGCGCG TGGTGCGCTA CGCATCGCCG CCGATCGACG ACGCGAACCG GCTGCGCAGC ATGCTGAAGG ACAGCAGCGT CGAAGGCTGG AGCTGGGTCG CGCTGATGGG GGGCGTCGGC GCGATCGACG CGAAGCTGTA CGTGCCGCGC GTGGGCTGGA CCACCAACCT GCAGACGGCC GACGAAGCGC TCGCACAGAA CAACGATGCA CTCAAGGTGC CGCAGATCGG CAACGCGCCG CCCGCACGCG CGGTGACGGG CCTGCAGGTC AGCATCGGCG CAACGTCGCT GCGCGTGCCG GTCACGCGCA TCTTCCTCGT CGGGGAATGA
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Protein sequence | MKPAVRSDAP MRRPLARPAR GFTLIELMIA IAILAVVAIL AWRGLDQIMR GRDKVAAAME DERVFAQMFD QMRIDARLAA TDDEAGQPAI GVAGNTLQIV RELEVPGVAP RLQVVRYRIA VGRVVRYASP PIDDANRLRS MLKDSSVEGW SWVALMGGVG AIDAKLYVPR VGWTTNLQTA DEALAQNNDA LKVPQIGNAP PARAVTGLQV SIGATSLRVP VTRIFLVGE
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