Gene Bcep18194_A3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3204 
Symbol 
ID3748351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp35982 
End bp36863 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID637761467 
ProductRNA polymerase sigma factor SigJ 
Protein accessionYP_367450 
Protein GI78064681 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00145046 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACC TCGACCCGGC CAAGGGCAGC GCCGAAGAAC GGGCCGATGC GGCCGCGAGT 
TTCGACCCGC TGCGCCGCAC GCTGATCCGC GTCGCGTACC GGATGCTCGG TTCCGTCGCG
GATGCCGAGG ACATGGTGCA GGAGGCGTTC ATCCGCTGGA TGGACGTCGA CCGCACCGAG
GTGCGCATCC CTGAAGCGTT CCTGCGCCGC ATGGTGATGC GCATGTGCCT CGACCAGCTG
AAGTCCGCGC GGCACCAGCG CGAGACGTAT ATCGGCCCGT GGCTGCCCGA GCCGGTCGTC
GAGGAAGATG AACAGGAAGA CGTCACGCTG CCGCTGATGC TCGCACTCGA ACGGCTCTCG
CCGCTCGAAC GCGCGGCGTT CCTGCTCCAT GACGTATTCG GCCTCGAGTT CGACGAGGTA
GCCACGACGA TCCAGCGCGA CCCGGCCGCG TGCCGGCAGC TCGCCGCGCG GGCCCGCACG
CATGTGCGCG AGGCGCGGCC GCGTTTCCAC GTCGAGAAGC AGCGCGGGAT CGAATTGGCG
GAAGCGTTCT TTGCGGCGTC ACGCAGCGGC GACATGCGCG CACTCGGCGC GATGCTCGCC
GAGGACGTGA GCCTGCATTC GGACGGCGGC GGCAAGCGCA CGGCTGCAGG CAAGCCCGTG
TTCGGCTTCG AACTCGTGAT GAAGGTGCAC GCGTACCTGG CCGAGCTGTT CACCACGCAT
GCGTCGAAGC TCGTGCGGGC CGGGTTCATC AACGGGCTGC CGGGTTTCGT CACGGAGGAA
TCCGATGGCG AGCTGCAGAC CACCGCGCTC GAGATCGAGG ACGGGAAGAT CGTTGCGATC
TATGTCGTGC GCAATCCTGA CAAGTTGAAG CATCTGCATT GA
 
Protein sequence
MPNLDPAKGS AEERADAAAS FDPLRRTLIR VAYRMLGSVA DAEDMVQEAF IRWMDVDRTE 
VRIPEAFLRR MVMRMCLDQL KSARHQRETY IGPWLPEPVV EEDEQEDVTL PLMLALERLS
PLERAAFLLH DVFGLEFDEV ATTIQRDPAA CRQLAARART HVREARPRFH VEKQRGIELA
EAFFAASRSG DMRALGAMLA EDVSLHSDGG GKRTAAGKPV FGFELVMKVH AYLAELFTTH
ASKLVRAGFI NGLPGFVTEE SDGELQTTAL EIEDGKIVAI YVVRNPDKLK HLH