Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_C7566 |
Symbol | |
ID | 3733854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007509 |
Strand | - |
Start bp | 1196450 |
End bp | 1197667 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637761267 |
Product | outer membrane protein (porin) |
Protein accession | YP_367254 |
Protein GI | 78060679 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0747228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.81381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAC AGGCATTGCG GATGGCGCTG ACGTCCGGCG TCGCGCTGGC CGCTGTCGCG CCGGCGTTCG CGCAGAGCAG CGTCACGCTG TACGGGATCG TCGACAACGG CATCGGCTAC CAGAGCAACG CGACGACGGT CGGCTCGACG AGCGGCGGGA AGTCGGTCGT CAGGATGAAC CAGGGCGTGT GGGCCGGCAG CCGCTTCGGG CTGAAGGGCA GCGAGGATCT CGGCGGCGGC ACGAAGGCGA TCTTCACGCT CGAATCGGGC TTCAATTCGG CGACGGGCGC CGCGCAGTAC ACCGACGCGA TCTTCGGGCG CCAGGCGTGG GTCGGGCTGA CCAACACCAC GTACGGCACG CTGACCGCCG GCCGGCAATA TGCGTCGTAT TACCAGACGA TGTCGCCGTT CAGCCCGACC ACGTGGATCA CCGGCTACTA CGGCGCGCAC CCGGGCGACG TCGACGGGCT CGACACGATC TACCGCGCGA ACAACACGAT CGAGTATACG TCGCCGAAAT GGTACGGCGT GACGCTGAGC GGTTCCTACT CGCTCGGCGG CGTAGCCGGC AGCACGAACG CCGGCTCGAC GTGGGCAACC GGCATCCAGT ACGCGGCCGG CCCGTTCGGC GCCGGCGTCG CGTTCGAGCG CGTGAACAAC GCGAACACGG CCGGCGGCGC GTGGGGCGCG AACTCGACGA CGTCGAACGG CGGTTCGCAG ATCGGCGTGT CGGCGGTCAC GAACGGCTAC CAGACCGCGA AGGCGCAGCA GCGGTTCGCG GTGGGCCTCA GCTACCGGTT CAGCGATGCG TGGGACGCGA CGGCGACGTA CACCAACACC GAGTACATCC CGGGTGCAGC GTCGAAGTTC TTCAATACCG CGGTCTTCAA CACGGCCGGC GCGGTGCTGC ACTGGAAGCC GTCGGCGGTC TGGGATTTCG GCGCGGGCTA TGCGTACACG CGTGCGACGG AATCGAACGG CATCACCGAC AGCGCGCAGT ATCACCAGTT CAACCTGTCG CAGTACTACT CGCTGTCGAA GCGCACGGGG CTGTACCTGC TCGAAGCGTA CCAGCACGCG AAGGGCAAGA CGCTCGGCAC GAGCGGCGCG GGCAGCATCG TCGACGCGAC CGCGACGCTG GGCGACGGGT TCAACACGGC GCCGTCGTCG ACCGGCAACC AGTTCGGATT CGGCGCAGGG ATCATCCACC GGTTCTGA
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Protein sequence | MKQQALRMAL TSGVALAAVA PAFAQSSVTL YGIVDNGIGY QSNATTVGST SGGKSVVRMN QGVWAGSRFG LKGSEDLGGG TKAIFTLESG FNSATGAAQY TDAIFGRQAW VGLTNTTYGT LTAGRQYASY YQTMSPFSPT TWITGYYGAH PGDVDGLDTI YRANNTIEYT SPKWYGVTLS GSYSLGGVAG STNAGSTWAT GIQYAAGPFG AGVAFERVNN ANTAGGAWGA NSTTSNGGSQ IGVSAVTNGY QTAKAQQRFA VGLSYRFSDA WDATATYTNT EYIPGAASKF FNTAVFNTAG AVLHWKPSAV WDFGAGYAYT RATESNGITD SAQYHQFNLS QYYSLSKRTG LYLLEAYQHA KGKTLGTSGA GSIVDATATL GDGFNTAPSS TGNQFGFGAG IIHRF
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