Gene Bcep18194_C7566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C7566 
Symbol 
ID3733854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp1196450 
End bp1197667 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content67% 
IMG OID637761267 
Productouter membrane protein (porin) 
Protein accessionYP_367254 
Protein GI78060679 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0747228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.81381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC AGGCATTGCG GATGGCGCTG ACGTCCGGCG TCGCGCTGGC CGCTGTCGCG 
CCGGCGTTCG CGCAGAGCAG CGTCACGCTG TACGGGATCG TCGACAACGG CATCGGCTAC
CAGAGCAACG CGACGACGGT CGGCTCGACG AGCGGCGGGA AGTCGGTCGT CAGGATGAAC
CAGGGCGTGT GGGCCGGCAG CCGCTTCGGG CTGAAGGGCA GCGAGGATCT CGGCGGCGGC
ACGAAGGCGA TCTTCACGCT CGAATCGGGC TTCAATTCGG CGACGGGCGC CGCGCAGTAC
ACCGACGCGA TCTTCGGGCG CCAGGCGTGG GTCGGGCTGA CCAACACCAC GTACGGCACG
CTGACCGCCG GCCGGCAATA TGCGTCGTAT TACCAGACGA TGTCGCCGTT CAGCCCGACC
ACGTGGATCA CCGGCTACTA CGGCGCGCAC CCGGGCGACG TCGACGGGCT CGACACGATC
TACCGCGCGA ACAACACGAT CGAGTATACG TCGCCGAAAT GGTACGGCGT GACGCTGAGC
GGTTCCTACT CGCTCGGCGG CGTAGCCGGC AGCACGAACG CCGGCTCGAC GTGGGCAACC
GGCATCCAGT ACGCGGCCGG CCCGTTCGGC GCCGGCGTCG CGTTCGAGCG CGTGAACAAC
GCGAACACGG CCGGCGGCGC GTGGGGCGCG AACTCGACGA CGTCGAACGG CGGTTCGCAG
ATCGGCGTGT CGGCGGTCAC GAACGGCTAC CAGACCGCGA AGGCGCAGCA GCGGTTCGCG
GTGGGCCTCA GCTACCGGTT CAGCGATGCG TGGGACGCGA CGGCGACGTA CACCAACACC
GAGTACATCC CGGGTGCAGC GTCGAAGTTC TTCAATACCG CGGTCTTCAA CACGGCCGGC
GCGGTGCTGC ACTGGAAGCC GTCGGCGGTC TGGGATTTCG GCGCGGGCTA TGCGTACACG
CGTGCGACGG AATCGAACGG CATCACCGAC AGCGCGCAGT ATCACCAGTT CAACCTGTCG
CAGTACTACT CGCTGTCGAA GCGCACGGGG CTGTACCTGC TCGAAGCGTA CCAGCACGCG
AAGGGCAAGA CGCTCGGCAC GAGCGGCGCG GGCAGCATCG TCGACGCGAC CGCGACGCTG
GGCGACGGGT TCAACACGGC GCCGTCGTCG ACCGGCAACC AGTTCGGATT CGGCGCAGGG
ATCATCCACC GGTTCTGA
 
Protein sequence
MKQQALRMAL TSGVALAAVA PAFAQSSVTL YGIVDNGIGY QSNATTVGST SGGKSVVRMN 
QGVWAGSRFG LKGSEDLGGG TKAIFTLESG FNSATGAAQY TDAIFGRQAW VGLTNTTYGT
LTAGRQYASY YQTMSPFSPT TWITGYYGAH PGDVDGLDTI YRANNTIEYT SPKWYGVTLS
GSYSLGGVAG STNAGSTWAT GIQYAAGPFG AGVAFERVNN ANTAGGAWGA NSTTSNGGSQ
IGVSAVTNGY QTAKAQQRFA VGLSYRFSDA WDATATYTNT EYIPGAASKF FNTAVFNTAG
AVLHWKPSAV WDFGAGYAYT RATESNGITD SAQYHQFNLS QYYSLSKRTG LYLLEAYQHA
KGKTLGTSGA GSIVDATATL GDGFNTAPSS TGNQFGFGAG IIHRF