Gene Bcep18194_C7502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C7502 
Symbol 
ID3734796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp1118733 
End bp1120160 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content66% 
IMG OID637761203 
Productmajor facilitator transporter 
Protein accessionYP_367190 
Protein GI78060615 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0253072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.395305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGA TCGACCTGAA CGCCGTCACC CCGGTTTCCT CGCCCATTCG CTCGGCCAGC 
GACGTCGCGC GCCTGATCAA CACGGTGGAC AGCTCGGTCA GCCATGCCCG GATGATCGTG
CTGCTGGCGC TCGGCGGCGT CTTTCTCGAT GCATATGATC TGACGACGCT GTCCTACGGG
ATCGACGACG TGGCGCGCGA GTTCGGCCTG ACGCCGGCAC TGACCGGGCT GGTCGGGTCG
GCGATCATGA TCGGCACGAT CTTCGGCAGC CTGATCGGCG GATGGCTGAC CGACAAGATC
GGCCGCTATC AGGTGTTCAT GGCCGACATG CTGTTTTTCG TGGTCGCGGC GATCGCGGCC
GGGCTGGCGC CGAACGTCTG GGTGCTGATC GGCGCGCGCT TCGTGATGGG GCTCGGTGTC
GGCATCGACC TGCCCGTCGC GATGGCGTTT CTCGCGGAGT TCTCGAAGTT CAACGGTCGC
GGCAACAAGG CGTCGCGGCT CGCGGCGTGG TGCCCGATGT GGTACGTGGC GTCCTCGGTC
TGCTTCCTGC TGATCTTCGG GCTGTATTTC CTGCTGCCCG CCGAGCACGC GGGATGGCTG
TGGCGCGCGT CGCTGATCTT CGGCGCGGTG CCCGCGCTCG TCATCATCCT GTTCAGGAAC
CGGTTCATGA ACGAATCGCC GCTGTGGGCC GCGAACCAGG GTGACCTGGC CAACGCCGCG
CGGATTCTGC GCGAGTCGTA CGGGATTCAT GCACACGAAG CGGAGGATGC CGGGCGCGCG
CCGAGCCCGC CGCCCGTGCG AATTCGTGTG CTGTTCCAGC ACCCGTACCT GGGGCGCACG
ATCGTCGCCA GCGTGATGAA CCTGTGCATC CCGTTCGAAT ACACGGCGAT CGCATTCTTC
CTGCCGTCGA TCCTGTCGCA GTTTCTCGGT GCTGGCGTGT TCGAAACGAT CGCCGCATCG
CTGGCGCTGA ACGTGCTGTT TGCGTTCACC GGCGGCTTGC TGGGCATGCG CCTCGCCCAT
CGCCATGCGT CGCGTCATGT CGCGATCGCG GGGTTCGCGC TTCAGTTCGT CGCGCTCGTG
GCGCTCGCGC TGGCGGGGCA TCCGCATGGC GCACTCGCGA TCGGCTTCGT GCTATTGATG
CTCGGCACCT GGCTGTTCGC AGAAGGGTTC GGGCCGGGCG CGCAGATGAT GATCTACCCG
ACGCTGTCGT ATCCGGCGGC GATCCGCGGT ACCGGCGTCG GCTTCGGGCG TTCGCTGTGC
GGCATCGGTC AGGCGCTTGC GCTGTTCGTG CTGCCGATCC TGCAGGCGCG GCTCGGTACG
GACATGTTCT GGGTTGTCGC GATCAGCGCC GCTACGCCGA TCGTGTTCCT GTTGATCGTG
CGTTACGAGC CGACGGCGCG TGATATCGAC GACGACGGCG TGGTTTGA
 
Protein sequence
MSSIDLNAVT PVSSPIRSAS DVARLINTVD SSVSHARMIV LLALGGVFLD AYDLTTLSYG 
IDDVAREFGL TPALTGLVGS AIMIGTIFGS LIGGWLTDKI GRYQVFMADM LFFVVAAIAA
GLAPNVWVLI GARFVMGLGV GIDLPVAMAF LAEFSKFNGR GNKASRLAAW CPMWYVASSV
CFLLIFGLYF LLPAEHAGWL WRASLIFGAV PALVIILFRN RFMNESPLWA ANQGDLANAA
RILRESYGIH AHEAEDAGRA PSPPPVRIRV LFQHPYLGRT IVASVMNLCI PFEYTAIAFF
LPSILSQFLG AGVFETIAAS LALNVLFAFT GGLLGMRLAH RHASRHVAIA GFALQFVALV
ALALAGHPHG ALAIGFVLLM LGTWLFAEGF GPGAQMMIYP TLSYPAAIRG TGVGFGRSLC
GIGQALALFV LPILQARLGT DMFWVVAISA ATPIVFLLIV RYEPTARDID DDGVV