Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_C7462 |
Symbol | |
ID | 3734044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007509 |
Strand | - |
Start bp | 1076150 |
End bp | 1077232 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637761163 |
Product | outer membrane protein (porin) |
Protein accession | YP_367150 |
Protein GI | 78060575 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00141122 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAA TCAGTCCGAT GCTGCTGATC CCTGTCTCGA TCGCCGCATT GGGTCTGCCG TCACAAACGC ATGCGCAAAG TCACGTCACG CTGTACGGTG TCGTGGATTC CGGTGTGATG TACACGAGCC GTAGCTTCGA CGCTGGAACG GGTGCCAGTG GCCCGCATCA GGTATCGGCA ACGGACGGCG CGATGTCGGG GTCGCTCTTC GGTATCACCG GCGTCGAGGA GTTGGGCGCC GGTACGAAGG CGATCTTTAC ACTGGAAAGC GGCTTTACGA CGAACAATGG GGCGCTGGGC AACTCGAACG GGAATTTCTT CGGACGGCAA GCCTTCGTGG GTCTGTCCGG GCGCTACGGT ATCGTCAAGG CCGGCCTGCA GTACTCGCCG TTCGGGCTTG CGATCGTCGA CACGGACGCA CGGCATGCGT CGTTCTTCGG GAGCCAGGCC GGAATTTACA TGGGCAACCT TTTCGCGACC GGCATTTTCG TCGCGAATGC CGTGTCCTAT ACGAGCCCGA CGATCGCCGG TATACAGGCG AGTGCCTTGC TTGCGCTGGG TAGCGATCCC AACGGATTTC AGGCGGGGCG CCAATATGCG GCTCGCGTGA GATACGAATG GAAAGACCTG GTCGTGAACG CGGCCCTCTT CAGTGGCAAT CCCGGTGGGT CAGCCAGCGT TTCCACGCCA TTCCCGTCGA CGATCGAATT CAGCGGGCGA ACCATCGGCG CGAGCTATAC GTGGGGAGGC GCAACACTGA AGGGATCGTA CACAAGCTAC AAGATCGCCG GCTCGTTCAA CGAGAAAGTG TACGCCGCGG GCGGCGAATA TCTGATCACG CCAGCACTGT CCGCCGACCT GGGCGTCTGG TACATGCGGG ACAGCAACGA CTCGGCGAAC CATTCGTTAC TGGCGTCTGC CGGGCTGGAC TACTTTCTGT CGAAACGAAC GACCTTGTAT GGCGCCGCTG CATGCGTGAA CAACCACGGG TTGATGCACA CCGGATTCAC GGTGAATGGT GCGCTGTATG AGCCAACCGG AAGCAGTGTG GGTATCGTCG TTGGTGTTCG TCACCGCTTC TAG
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Protein sequence | MQKISPMLLI PVSIAALGLP SQTHAQSHVT LYGVVDSGVM YTSRSFDAGT GASGPHQVSA TDGAMSGSLF GITGVEELGA GTKAIFTLES GFTTNNGALG NSNGNFFGRQ AFVGLSGRYG IVKAGLQYSP FGLAIVDTDA RHASFFGSQA GIYMGNLFAT GIFVANAVSY TSPTIAGIQA SALLALGSDP NGFQAGRQYA ARVRYEWKDL VVNAALFSGN PGGSASVSTP FPSTIEFSGR TIGASYTWGG ATLKGSYTSY KIAGSFNEKV YAAGGEYLIT PALSADLGVW YMRDSNDSAN HSLLASAGLD YFLSKRTTLY GAAACVNNHG LMHTGFTVNG ALYEPTGSSV GIVVGVRHRF
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