Gene Bcep18194_C7462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C7462 
Symbol 
ID3734044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp1076150 
End bp1077232 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content60% 
IMG OID637761163 
Productouter membrane protein (porin) 
Protein accessionYP_367150 
Protein GI78060575 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00141122 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA TCAGTCCGAT GCTGCTGATC CCTGTCTCGA TCGCCGCATT GGGTCTGCCG 
TCACAAACGC ATGCGCAAAG TCACGTCACG CTGTACGGTG TCGTGGATTC CGGTGTGATG
TACACGAGCC GTAGCTTCGA CGCTGGAACG GGTGCCAGTG GCCCGCATCA GGTATCGGCA
ACGGACGGCG CGATGTCGGG GTCGCTCTTC GGTATCACCG GCGTCGAGGA GTTGGGCGCC
GGTACGAAGG CGATCTTTAC ACTGGAAAGC GGCTTTACGA CGAACAATGG GGCGCTGGGC
AACTCGAACG GGAATTTCTT CGGACGGCAA GCCTTCGTGG GTCTGTCCGG GCGCTACGGT
ATCGTCAAGG CCGGCCTGCA GTACTCGCCG TTCGGGCTTG CGATCGTCGA CACGGACGCA
CGGCATGCGT CGTTCTTCGG GAGCCAGGCC GGAATTTACA TGGGCAACCT TTTCGCGACC
GGCATTTTCG TCGCGAATGC CGTGTCCTAT ACGAGCCCGA CGATCGCCGG TATACAGGCG
AGTGCCTTGC TTGCGCTGGG TAGCGATCCC AACGGATTTC AGGCGGGGCG CCAATATGCG
GCTCGCGTGA GATACGAATG GAAAGACCTG GTCGTGAACG CGGCCCTCTT CAGTGGCAAT
CCCGGTGGGT CAGCCAGCGT TTCCACGCCA TTCCCGTCGA CGATCGAATT CAGCGGGCGA
ACCATCGGCG CGAGCTATAC GTGGGGAGGC GCAACACTGA AGGGATCGTA CACAAGCTAC
AAGATCGCCG GCTCGTTCAA CGAGAAAGTG TACGCCGCGG GCGGCGAATA TCTGATCACG
CCAGCACTGT CCGCCGACCT GGGCGTCTGG TACATGCGGG ACAGCAACGA CTCGGCGAAC
CATTCGTTAC TGGCGTCTGC CGGGCTGGAC TACTTTCTGT CGAAACGAAC GACCTTGTAT
GGCGCCGCTG CATGCGTGAA CAACCACGGG TTGATGCACA CCGGATTCAC GGTGAATGGT
GCGCTGTATG AGCCAACCGG AAGCAGTGTG GGTATCGTCG TTGGTGTTCG TCACCGCTTC
TAG
 
Protein sequence
MQKISPMLLI PVSIAALGLP SQTHAQSHVT LYGVVDSGVM YTSRSFDAGT GASGPHQVSA 
TDGAMSGSLF GITGVEELGA GTKAIFTLES GFTTNNGALG NSNGNFFGRQ AFVGLSGRYG
IVKAGLQYSP FGLAIVDTDA RHASFFGSQA GIYMGNLFAT GIFVANAVSY TSPTIAGIQA
SALLALGSDP NGFQAGRQYA ARVRYEWKDL VVNAALFSGN PGGSASVSTP FPSTIEFSGR
TIGASYTWGG ATLKGSYTSY KIAGSFNEKV YAAGGEYLIT PALSADLGVW YMRDSNDSAN
HSLLASAGLD YFLSKRTTLY GAAACVNNHG LMHTGFTVNG ALYEPTGSSV GIVVGVRHRF