Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_C7396 |
Symbol | |
ID | 3734311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007509 |
Strand | - |
Start bp | 1005570 |
End bp | 1006769 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637761097 |
Product | capsule polysaccharide biosynthesis |
Protein accession | YP_367084 |
Protein GI | 78060509 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3562] Capsule polysaccharide export protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.436422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCTGA TAGTCATCGA TTCCCTCGAG CGGTACTTCT TCGTCAACCG TCTGGTGAGC CCGGTCAGGC ACGAGTACGA GTTCGCGTTC CTGACGAGCG AGCCCGTCGC GCATCTCGGC CTGCTGCTGG GCGGCTATCG GTCGGTGTAC CTGAACCGCC TGATGCCGAT CGACATGCCG GACGGGCAGG CGGCCGACCG GACGCCGTAC CGGCTGTCGA TCGAGGTGCT GAACGGGCAA ATGACGGAGG CGCGCGCGAA GCGCGAGTCG GCGGCGATTT TCCATATCGC GTCCGAGCTG TTGCGCGGCG GGCGAGTCGA GCAGTGCGTG ATGTGGAACG GGCAACAACT GGTGTGCAGG GCGGTTCGCC AGGCATGCAC CGTGTACGGC GTGGCGACCC GGTTCATCGA GATCTCGAAT CTCCCGGGCA AGCTGTTCGT CGACTCGCTG GGCGTCAATG CGCTGTCGAC GATCAGCCAC CACCCCGAAG TCATCGACGG TCTGCCGCTG CCCGACGAGG AGACGCATGC GCGATGGCTG TCGCGCTACG AGCGCGACAA GCGGATGCCG CTGCCGCAGG CGCGGACGTC GCTGGCCCGC AAGGTGATGT CCGCGACCAA CTACGTGCTG AAGGTGGTCA GCCGCGGGGT GGCCCGCAAG CGCCTCGCCA GCGTGCGCGC GCGCAACGGG ATGCCGGCGC CCCGGCAGGC GGCGAATCTG TCGACCGATA CGCTGTCGAC CAGCCGCTAC GTGTTTCTGC CGCTCCAGGT GTCCGGCGAT ACGCAGATCA AGCTGCATTC GGACGTCGGC AATCTCGAGG CGATCCGTCA TGCGTTCGAG TTCGCGGCGA ACGAGAGCGC CGACCTGTTC GTGAAGCTTC ATCCGGCCGA GACCGACGCG GCCGAGATCG ATGCGATCGT GCGCCTGCAG GACACCTACC ACTTCGAAAT CGTCACGTCA CCGACCACGG ACCTGCTCAA GCACGCGTAC GCGGTCGTCA CGATCAATTC GACGGTCGGT CTGGAGGCGA TGCTGTACGG CAAGCGCGTG GTGTCGCTCG GCCGGTGCTT CTACAAGGAA TTCGACCGCG AGCGCCTGCT GAAGTACATC CATTCGTTCC TGATCGACGG AATCGACTAC TTCGGCACCG CGCGCATCCC GGCCGATGCG GCCCGGCGCG TGTTCGCGAG GCCCCATTGA
|
Protein sequence | MILIVIDSLE RYFFVNRLVS PVRHEYEFAF LTSEPVAHLG LLLGGYRSVY LNRLMPIDMP DGQAADRTPY RLSIEVLNGQ MTEARAKRES AAIFHIASEL LRGGRVEQCV MWNGQQLVCR AVRQACTVYG VATRFIEISN LPGKLFVDSL GVNALSTISH HPEVIDGLPL PDEETHARWL SRYERDKRMP LPQARTSLAR KVMSATNYVL KVVSRGVARK RLASVRARNG MPAPRQAANL STDTLSTSRY VFLPLQVSGD TQIKLHSDVG NLEAIRHAFE FAANESADLF VKLHPAETDA AEIDAIVRLQ DTYHFEIVTS PTTDLLKHAY AVVTINSTVG LEAMLYGKRV VSLGRCFYKE FDRERLLKYI HSFLIDGIDY FGTARIPADA ARRVFARPH
|
| |