| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C7220 |
|---|
| Symbol | |
|---|
| ID | 3734944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007509 |
|---|
| Strand | + |
|---|
| Start bp | 808513 |
|---|
| End bp | 810216 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637760921 |
|---|
| Product | putative cobalamin biosynthesis protein, CobT |
|---|
| Protein accession | YP_366908 |
|---|
| Protein GI | 78060333 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
|---|
| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.557339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGGG ACGACGACGC GCGCTCGCTC CACCTGACCC GGCTGGCCCG CACGCTCGCG
CAACGGCACG GCATCGAGGT GCGGTTCGCT CGCCATGCGC CGGTCGCGCA GCGCGACCGG
CTGGTGCTGC CCGACACGCT GCTCGCCGGC GACGTCGACG ACGACGCGAT CACCGGCCTC
GTCGACCTCT ACGCGGCGCG CGAGCGCTTC GGTGCGATCG ATGACATCGC CGCACTGGCG
TCGCCCGCGG TGCGGGCCAT CGCGCAGGCG ATCGACGACC GCCGCGCGGC CGGCCGCCTC
GCTGCGATCT ATCCCGGCGC CATGACGTTC CTGCTGCGGA TGCGCGCGGT GACGGCCGCC
GACACGCTCC TCCGATGGCC GCGAATGGCA TGGCGCGACA GGCTGGTATG GCGCGTCGAA
CGCGCGCTGT GGGACGAAGC GCCGTCCGCC ATCGAGCACG TGCCGTCGCT CGACGCGACG
CTTGCCGCAT CGGACGATCT CGTCGACGCA GCGCGCGCCG CGACATCGAC CGCCGACAGC
ATCCGCGCCG CGCAGCGGAT CGTCGAACGC GTGCGTGCGC TGGCGTCGGC CGGTGCGAAC
AACATGATGT TCACGGCCGA CCCGGGCAGC ACGCTCGACA GCGCCAGCAT CGCCGCCGAG
TTCGACCAGG ACGGACAGGG CGCCCCGGAC GACTCACGTG CACCGGTTTC CGCCGAATCG
GGTGCCGGTG CGATCGCCGA CACGGCATCG TCGGCCGAAG CGCCGACGCC GGGCGATGCG
ATGCCCGGCA CGATCCGCCT GTCTGCGGAC AACCGGCCGC TGCTGTCGGT CCCGCTGACC
ACCGCGTTCG ACACGGTGAC GGACTTCACC GGCAACGGCG AACCGGCGCA CTGGCACCGC
CTGCGAAGCG CGGCCCGCGC GCAGACCGAG CCGCTCAAGC TGAAACTCGA ACGCGCATTG
AAAGTGGACG AGCAGACGCG CTGGAAACGC GAACAGGAAC GCGGCGAGCT CGACCGGATG
TCGCTCGCGC GCCTCGTCAC CTCGCCCGGC TATCGCACGC CATTCCGCGT CCGGCGTGCC
GCCCCCGGGC GCGATGCGGC CGTCAGCCTG CTGATCGATT GCAGCGGGTC GATGGCCGGC
AAGAAGATCG AACTCGCCAG GCTGTGCGCG GCGGCGCTGT GCGATGCGCT GACGCAGCTC
GGTTTCGCGT GCGAAGTGCT CGGCTACAGC TCCGTCGAGG ACGCCGCGAT GCGCGCGCAC
TACCAGCGCT GGATCGACGC CGGCCGCGAG ACGTTCGGCT ACAACCGGTT CGTCGAACGG
CTCGACCTGC GCGTCTACAA GCGCTTCGAT TCCGACAACC CGAGCGGCCT CGCGTGCATC
GAATGCGGCC ACGAGAATCC TGACGGCGAG GCGTTGAGCT GGGCCGCCGG GCGGCTGCTG
GCGAAGCGGG CCCGGCGGCG AATCCTGATG GTGCTGTCGG ACGGCTATCC GGCGACCGGC
GACGGCAACC CGGCGATCCT GCGCACCGAC CTGCGTGCAC GCGTCGAGGC GCTGCGCGAG
CGGCGCGTCG AACTGATCGG CGTCGGGATA CTCGACGATT CGGTCGAAAC GTTCTATCCG
GTCAGCAGCG TGGTCGAGCA TCTGCACGAG CTGCCGGGCG CGGCGTTCAG CGTCCTGGGC
GATACGCTGC TGGATCGGCG CTAG
|
|---|
| Protein sequence | MDRDDDARSL HLTRLARTLA QRHGIEVRFA RHAPVAQRDR LVLPDTLLAG DVDDDAITGL
VDLYAARERF GAIDDIAALA SPAVRAIAQA IDDRRAAGRL AAIYPGAMTF LLRMRAVTAA
DTLLRWPRMA WRDRLVWRVE RALWDEAPSA IEHVPSLDAT LAASDDLVDA ARAATSTADS
IRAAQRIVER VRALASAGAN NMMFTADPGS TLDSASIAAE FDQDGQGAPD DSRAPVSAES
GAGAIADTAS SAEAPTPGDA MPGTIRLSAD NRPLLSVPLT TAFDTVTDFT GNGEPAHWHR
LRSAARAQTE PLKLKLERAL KVDEQTRWKR EQERGELDRM SLARLVTSPG YRTPFRVRRA
APGRDAAVSL LIDCSGSMAG KKIELARLCA AALCDALTQL GFACEVLGYS SVEDAAMRAH
YQRWIDAGRE TFGYNRFVER LDLRVYKRFD SDNPSGLACI ECGHENPDGE ALSWAAGRLL
AKRARRRILM VLSDGYPATG DGNPAILRTD LRARVEALRE RRVELIGVGI LDDSVETFYP
VSSVVEHLHE LPGAAFSVLG DTLLDRR
|
|---|
| |