Gene Bcep18194_C7111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C7111 
Symbol 
ID3734718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp681725 
End bp683866 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content68% 
IMG OID637760812 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_366799 
Protein GI78060224 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.430006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.473788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGG CCCATGCGAC GGATAGGGGA AGAAAGGTTT TGGTGACAGT TTTCGGGTGC 
ATCGTTCATC GGCACAACCA CTGGCTGGTG TTGCTTGCCG CATTGTTGTG CGGGGGCGGC
TCGTGGGTCA CCGCGCGCCT GTTCCAGCGC ACGGTGAACA CCGCCGGCAC GCAGCGGCTC
GGCTGGCAGG TGCTGACCGC CATTTCGGCC GGCGTGGCGA TCTGGTGCAC GCACTTCATC
GCGATGCTCG GCTTCGACGC CGGCGCGCCC GTGCACTTCA ACCTGCCGCT CACGCTCGTG
TCGCTGCTCA TCGCGGTCGG CGGCAGCACG ATCGGCTTCG CGCTGACGAC CTGTCGCATC
GTCAAGGTTG CGCCCGCGCT CGGCGGCGCG ATCGTCGGCG TGGCGATCGT GCTGATGCAC
TACACCGGCA TGCTCGCGTG GCGGGTCGAA GGGATCGTGT CGTGGGACCT GAGCTACCTG
ATCGCGTCGG TGCTCCTCGC GATGACCCTC GCCGCGCTCG CGCTGCACCT CGCGATGCGG
CCGTCGCCGC ACGCCGTCAA CCAGATGGCC GGCGTGCTGT CGCTCGCGAT CCTCGCGTTG
CATTTCACCG GGATGTGCGC GCTGCGCATC ACGCCGCTGG TGCTCGACGG TTCATGGACC
GACGTGAGCG AGCTGCGTCC GCTGGCGCTG GCGGTCGCGG GCACGTCGCT CGTGATCGTC
TGCACGGGGC TCGTGAGCTA TGTGATCGAC AGCAACGTGC GGGCCGAATC GCTCGAACAC
CTGCGCCGGC TGGCGCTGAG CGACATGCTG ACCGGCCTGC CCAACCGGGC CAGCTTCAAC
GAGCGGCTCG ACCTCGAAAT CGCGCTGGCG CAAGCGCACG GCAGGAAGCT CGCGCTGATC
GGCATCGACC TGAACCGCTT CAAGGAAATC AACGACCTGC GCGGCCACCA CGCCGGCGAC
GAGGTGCTGC GCATCCTTGC GCGCCGCATG ACGAACCTGC TGCGCGAAGG CGAATTCGTC
GCCCGCATCG GCGGCGACGA ATTCGCGGCG CTCTGCCGGA TGGACGACGA CACGCGCCTG
ATGAACCTGC TCGAGCGGCT CGAGCCGGCA CTCTACAAGC CGGTCAGGCT GGACGACTAC
GAGGTCGTGC CGGGCGCGAG CTTCGGTGTT GCGATCTACC CGGACGACGC CACCACCAAG
GCCGTCCTCA TCAACAACGC GGACCTCGCG ATGTACCGCG CCAAGGGCAG CATCGCGCAA
TCGATCTGCT TCTACGAGCC GGCGATGGAC CTGATCGTCC GCGCGCGCCG CAGCCTCGCG
GCCGACCTGC GCCGCGCGGT GGCCGACAAC CAGTTGAGCG TCCACTACCA GGTGCAGACT
TCGCTCGCGA CCGGCGAGAT CCGCGGCTAC GAGGCGCTGC TGCGCTGGCA GCATGCGACG
CTCGGCACGA TTCCGCCCGC CGAGTTCATT CCGCTGGCCG AGGAAAACGG CGTGATCCTG
GACATCGGCG CGTGGGTGCT GCGCGAGGCA TGCGCGCGGG CGGCCACGTG GGAGCCGCCC
TATGCGGTCG CGGTGAACGT ATCGGCCGTG CAGTTCATGC ACGCGGACCT GACAGCGCTC
GTGGCCGACG TGCTCGAAGA AACCCGCCTG CCGGCGTCGC GCCTGCAGCT GGAGCTGACC
GAATCGACGA TCTTCGCGGG CCGCGAGCGC GCGCTGGACA CGCTGCGGCA GATCAAGGCG
CTGGGCGTGA GCATCGCGCT CGACGATTTC GGTACCGGCT ATTCGTCGCT CGACACGCTG
CGCTCGTTCC CGTTCGACCG CATCAAGCTC GACCAGTCGT TCGTCGCGGA CGCGGAAGCG
AAACCGCAGG ATCGCGCGAT CATCCGCGCC GTGCTCGCGC TCGGCAAGAG CCTGGGCATT
CCGATCCTGG CCGAAGGCAT CGAGACACGC GACCAGCTGG CGCTGCTGGC CGACGAAGGT
TGCGACGAAG CGCAGGGCTT CCTGCTCGGC AGGCCTGCGC CCCTCAACGA GATCGTCGGC
AGCGGGCAGA TTGCGCTGAC CGGCGGCAAC CGCGTCCGCC CGCCGGTTCC CGCGTCCGAA
TCGGCCGTCA ACGCCGATCT CGACCCGGAC CCGCGCGGGT AA
 
Protein sequence
MASAHATDRG RKVLVTVFGC IVHRHNHWLV LLAALLCGGG SWVTARLFQR TVNTAGTQRL 
GWQVLTAISA GVAIWCTHFI AMLGFDAGAP VHFNLPLTLV SLLIAVGGST IGFALTTCRI
VKVAPALGGA IVGVAIVLMH YTGMLAWRVE GIVSWDLSYL IASVLLAMTL AALALHLAMR
PSPHAVNQMA GVLSLAILAL HFTGMCALRI TPLVLDGSWT DVSELRPLAL AVAGTSLVIV
CTGLVSYVID SNVRAESLEH LRRLALSDML TGLPNRASFN ERLDLEIALA QAHGRKLALI
GIDLNRFKEI NDLRGHHAGD EVLRILARRM TNLLREGEFV ARIGGDEFAA LCRMDDDTRL
MNLLERLEPA LYKPVRLDDY EVVPGASFGV AIYPDDATTK AVLINNADLA MYRAKGSIAQ
SICFYEPAMD LIVRARRSLA ADLRRAVADN QLSVHYQVQT SLATGEIRGY EALLRWQHAT
LGTIPPAEFI PLAEENGVIL DIGAWVLREA CARAATWEPP YAVAVNVSAV QFMHADLTAL
VADVLEETRL PASRLQLELT ESTIFAGRER ALDTLRQIKA LGVSIALDDF GTGYSSLDTL
RSFPFDRIKL DQSFVADAEA KPQDRAIIRA VLALGKSLGI PILAEGIETR DQLALLADEG
CDEAQGFLLG RPAPLNEIVG SGQIALTGGN RVRPPVPASE SAVNADLDPD PRG