Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_C7111 |
Symbol | |
ID | 3734718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007509 |
Strand | - |
Start bp | 681725 |
End bp | 683866 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637760812 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_366799 |
Protein GI | 78060224 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.430006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.473788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGG CCCATGCGAC GGATAGGGGA AGAAAGGTTT TGGTGACAGT TTTCGGGTGC ATCGTTCATC GGCACAACCA CTGGCTGGTG TTGCTTGCCG CATTGTTGTG CGGGGGCGGC TCGTGGGTCA CCGCGCGCCT GTTCCAGCGC ACGGTGAACA CCGCCGGCAC GCAGCGGCTC GGCTGGCAGG TGCTGACCGC CATTTCGGCC GGCGTGGCGA TCTGGTGCAC GCACTTCATC GCGATGCTCG GCTTCGACGC CGGCGCGCCC GTGCACTTCA ACCTGCCGCT CACGCTCGTG TCGCTGCTCA TCGCGGTCGG CGGCAGCACG ATCGGCTTCG CGCTGACGAC CTGTCGCATC GTCAAGGTTG CGCCCGCGCT CGGCGGCGCG ATCGTCGGCG TGGCGATCGT GCTGATGCAC TACACCGGCA TGCTCGCGTG GCGGGTCGAA GGGATCGTGT CGTGGGACCT GAGCTACCTG ATCGCGTCGG TGCTCCTCGC GATGACCCTC GCCGCGCTCG CGCTGCACCT CGCGATGCGG CCGTCGCCGC ACGCCGTCAA CCAGATGGCC GGCGTGCTGT CGCTCGCGAT CCTCGCGTTG CATTTCACCG GGATGTGCGC GCTGCGCATC ACGCCGCTGG TGCTCGACGG TTCATGGACC GACGTGAGCG AGCTGCGTCC GCTGGCGCTG GCGGTCGCGG GCACGTCGCT CGTGATCGTC TGCACGGGGC TCGTGAGCTA TGTGATCGAC AGCAACGTGC GGGCCGAATC GCTCGAACAC CTGCGCCGGC TGGCGCTGAG CGACATGCTG ACCGGCCTGC CCAACCGGGC CAGCTTCAAC GAGCGGCTCG ACCTCGAAAT CGCGCTGGCG CAAGCGCACG GCAGGAAGCT CGCGCTGATC GGCATCGACC TGAACCGCTT CAAGGAAATC AACGACCTGC GCGGCCACCA CGCCGGCGAC GAGGTGCTGC GCATCCTTGC GCGCCGCATG ACGAACCTGC TGCGCGAAGG CGAATTCGTC GCCCGCATCG GCGGCGACGA ATTCGCGGCG CTCTGCCGGA TGGACGACGA CACGCGCCTG ATGAACCTGC TCGAGCGGCT CGAGCCGGCA CTCTACAAGC CGGTCAGGCT GGACGACTAC GAGGTCGTGC CGGGCGCGAG CTTCGGTGTT GCGATCTACC CGGACGACGC CACCACCAAG GCCGTCCTCA TCAACAACGC GGACCTCGCG ATGTACCGCG CCAAGGGCAG CATCGCGCAA TCGATCTGCT TCTACGAGCC GGCGATGGAC CTGATCGTCC GCGCGCGCCG CAGCCTCGCG GCCGACCTGC GCCGCGCGGT GGCCGACAAC CAGTTGAGCG TCCACTACCA GGTGCAGACT TCGCTCGCGA CCGGCGAGAT CCGCGGCTAC GAGGCGCTGC TGCGCTGGCA GCATGCGACG CTCGGCACGA TTCCGCCCGC CGAGTTCATT CCGCTGGCCG AGGAAAACGG CGTGATCCTG GACATCGGCG CGTGGGTGCT GCGCGAGGCA TGCGCGCGGG CGGCCACGTG GGAGCCGCCC TATGCGGTCG CGGTGAACGT ATCGGCCGTG CAGTTCATGC ACGCGGACCT GACAGCGCTC GTGGCCGACG TGCTCGAAGA AACCCGCCTG CCGGCGTCGC GCCTGCAGCT GGAGCTGACC GAATCGACGA TCTTCGCGGG CCGCGAGCGC GCGCTGGACA CGCTGCGGCA GATCAAGGCG CTGGGCGTGA GCATCGCGCT CGACGATTTC GGTACCGGCT ATTCGTCGCT CGACACGCTG CGCTCGTTCC CGTTCGACCG CATCAAGCTC GACCAGTCGT TCGTCGCGGA CGCGGAAGCG AAACCGCAGG ATCGCGCGAT CATCCGCGCC GTGCTCGCGC TCGGCAAGAG CCTGGGCATT CCGATCCTGG CCGAAGGCAT CGAGACACGC GACCAGCTGG CGCTGCTGGC CGACGAAGGT TGCGACGAAG CGCAGGGCTT CCTGCTCGGC AGGCCTGCGC CCCTCAACGA GATCGTCGGC AGCGGGCAGA TTGCGCTGAC CGGCGGCAAC CGCGTCCGCC CGCCGGTTCC CGCGTCCGAA TCGGCCGTCA ACGCCGATCT CGACCCGGAC CCGCGCGGGT AA
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Protein sequence | MASAHATDRG RKVLVTVFGC IVHRHNHWLV LLAALLCGGG SWVTARLFQR TVNTAGTQRL GWQVLTAISA GVAIWCTHFI AMLGFDAGAP VHFNLPLTLV SLLIAVGGST IGFALTTCRI VKVAPALGGA IVGVAIVLMH YTGMLAWRVE GIVSWDLSYL IASVLLAMTL AALALHLAMR PSPHAVNQMA GVLSLAILAL HFTGMCALRI TPLVLDGSWT DVSELRPLAL AVAGTSLVIV CTGLVSYVID SNVRAESLEH LRRLALSDML TGLPNRASFN ERLDLEIALA QAHGRKLALI GIDLNRFKEI NDLRGHHAGD EVLRILARRM TNLLREGEFV ARIGGDEFAA LCRMDDDTRL MNLLERLEPA LYKPVRLDDY EVVPGASFGV AIYPDDATTK AVLINNADLA MYRAKGSIAQ SICFYEPAMD LIVRARRSLA ADLRRAVADN QLSVHYQVQT SLATGEIRGY EALLRWQHAT LGTIPPAEFI PLAEENGVIL DIGAWVLREA CARAATWEPP YAVAVNVSAV QFMHADLTAL VADVLEETRL PASRLQLELT ESTIFAGRER ALDTLRQIKA LGVSIALDDF GTGYSSLDTL RSFPFDRIKL DQSFVADAEA KPQDRAIIRA VLALGKSLGI PILAEGIETR DQLALLADEG CDEAQGFLLG RPAPLNEIVG SGQIALTGGN RVRPPVPASE SAVNADLDPD PRG
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