Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_C7110 |
Symbol | |
ID | 3734717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007509 |
Strand | - |
Start bp | 679340 |
End bp | 681682 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637760811 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_366798 |
Protein GI | 78060223 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.494922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCTC ACATGAAAAC CCACTACGCA CGGATGACAA GACTGGCAAG CAACGCGGCG CCGGCCCGGA ACCCGGAGCT GCTCGCGGCG CAATACCGGG TATTCGCCGG CCAGATCCCG GTGTCGTACC TGATCCTGAT CTCGAGCACC TGGAGCCTCG CCATCACGCA CCTGCGCAGC ACGCCGTGGT GGCTGTCGGT CGCGATCCCG GCCGCGATGA CGCTCGCGGC GCTGGCGCGG CTGCTGCACT GGCACCGCAC CCGGCTGCTC GAGCCGACGC CGGACACCGT GATGCGCGCG CTCACGGTCA CGAACTGGCT GGTGGTCCCG GTCGCCGTGA CGTTCACCAC CTGGGCGCTG CTGCTGTTCC CGTACGGCGA CGCGTGGCAA AAGGCCCAGG TCGCGTTCTA CCTGGCGATC ACGGTGATCG GCTGCATCTT CAGCCTGATG TACCTGCGCA CGGCTGCGCT GAGCGTGGCC GTGATCGTCA ACGTCGCGTT CATCGTGTTC TTCATCTCGA CCGGCCAGCC GACGCTCGTC GCCACCGCGG TCAACATGGC CTTCGTGTCG GCGGCGCTGA TCGCCGTCAT CTCGGTCAAC TACCGCGGCT TCCTGCGCAC CGTCGATGCG CAGGCCGAAT CGCGGATGCG CGAGCAGGCG CAGACGCGGC TGATGCGGAT GATCGACGAC ATGCCGGTGG CCGTGATGAC GGCCGACCCG GAGACGTTCC GCATCAACTA CCTGAACGCA ACGTCGCGCA ACCTGCTGCG CACGATCGAG CACCTGCTGC CGATTCGCGC GGACGATGCG CTCGGCGCGT CGATCGACTT CTTCCACCCG CACCCGCAGC ACCAGCGCCG CCTGCTCGCC GATCCGGCGA ACCTGCCGCA TCGCGCGCGC ATCGGGCTCG GGCCGGAAGT GCTCGACATC CAGGTCTCGG CCGTGCGCGA CGCCGACGGG CGCTACATCG GCCCGATGCT GTCGTGGTCG ATCGTCACGC AGCAGGCCGA GGCGGAGGCG CGCATCCACC AGCTCGCGCA TCACGATTCG CTCACGGGCC TGCCGAACCG CGCAACCTTT CTGGCCGAAT TCGATGCGAG CCTGCGCCGC TCGGACAAGG TGCTCGGGCT GCTGTTCATC GACCTCGACG GCTTCAAGCT GATCAACGAC GCGTGCGGGC ATTCGGCGGG CGACGAGGTG CTGCGCCAGG TCGGGGAACG CCTGCGCGGG CAGTGCCCCG AGCCGGGGAT GATGCTCGGG CGCATCGGCG GCGACGAATT CGCGGTGCTG CTGCGCGACA CCGACGCGGA CCGCGCGATG GGCGCGGCCG CGCGGCTCGT CGACACGCTC GTTGCTCCCT ATGCACCGTC GCCCGACCGC CAGTTCCGCA TCGGTGCGTC GATCGGCTGC GTGCTGGCGC CGGATCACGG CAACGACGGC GGCGTGCTGC TGTCACGCGC GGACATGGCG CTCTATGCGG CCAAGAAAGC CGGGAAGGGC ACCTACCGGA TGTTCTCGCC GGACATGGAA ACGAGCGCAC AGGAGCGGGT CGCGCTCGAA TCGAAGCTGC GCGTCGCGCT GGACGAGAAC CAGGGGCTGT ACGTGTTCTA CCAGCCGATC GTCGATGTCC GCACCCGCCA GATCACGACG CGCGAGGCGC TGCTGCGCTG GCATCACCCG CGCGCCGGCT GGATTTCGCC GGGCCGCTTC ATTCCGGTGG CCGAGCGCGG CGGCCTGATC GACCGGCTCG GCCGCTTCGT GCTCGAGCAG GCCTGCCGGG AGGCGGCGCG CTGGCCCGAC GGCGCGCGCG TCGCCGTCAA CGTGTCGGCG GGGCAGCTCG GCCACGGCAC GATCGTGCCG ACCTTCGCGG CCGCGCTGGC CGGCGCGGGG CTCACGCCCG ACCGGCTGGA AATCGAAGTG ACGGAAACCG CGCTGCTGCA CGACGAGGGC AAGGCCATCG CGGACTTGCG CGCGCTGCGT TCGATGGGCG TGCGTGTCGC CCTCGATGAC TTCGGCACGG GCTTCTCGTC GCTCGCGCAT CTGCGCGCGT TCCCGTTCGA CAAGATCAAG ATCGACGGCA GCTTCGTGCG CGATGCGGTC ACGCGCCCGG ACTGCGCAGC TGTCGTGCGC GCCGTTGCCG ATCTCGGCAA GCGTCTCGGC GTGACGACTG TCGCGGAAGG CGTCGAGACG GAAGAGCAAC TGGCGTGCAT CACGGATGCC GGCTGCCGCG AGGTGCAGGG CTTCCTGATC GGCAGGCCCG CGCCGGGCGA GCAGGATGCG CCGGCCATCC GCTGGATCGA GCGGGCCGCG CTGGCGGCGC AGGCTACGGC CAGGCAGGCG TAA
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Protein sequence | MQAHMKTHYA RMTRLASNAA PARNPELLAA QYRVFAGQIP VSYLILISST WSLAITHLRS TPWWLSVAIP AAMTLAALAR LLHWHRTRLL EPTPDTVMRA LTVTNWLVVP VAVTFTTWAL LLFPYGDAWQ KAQVAFYLAI TVIGCIFSLM YLRTAALSVA VIVNVAFIVF FISTGQPTLV ATAVNMAFVS AALIAVISVN YRGFLRTVDA QAESRMREQA QTRLMRMIDD MPVAVMTADP ETFRINYLNA TSRNLLRTIE HLLPIRADDA LGASIDFFHP HPQHQRRLLA DPANLPHRAR IGLGPEVLDI QVSAVRDADG RYIGPMLSWS IVTQQAEAEA RIHQLAHHDS LTGLPNRATF LAEFDASLRR SDKVLGLLFI DLDGFKLIND ACGHSAGDEV LRQVGERLRG QCPEPGMMLG RIGGDEFAVL LRDTDADRAM GAAARLVDTL VAPYAPSPDR QFRIGASIGC VLAPDHGNDG GVLLSRADMA LYAAKKAGKG TYRMFSPDME TSAQERVALE SKLRVALDEN QGLYVFYQPI VDVRTRQITT REALLRWHHP RAGWISPGRF IPVAERGGLI DRLGRFVLEQ ACREAARWPD GARVAVNVSA GQLGHGTIVP TFAAALAGAG LTPDRLEIEV TETALLHDEG KAIADLRALR SMGVRVALDD FGTGFSSLAH LRAFPFDKIK IDGSFVRDAV TRPDCAAVVR AVADLGKRLG VTTVAEGVET EEQLACITDA GCREVQGFLI GRPAPGEQDA PAIRWIERAA LAAQATARQA
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