Gene Bcep18194_C7110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C7110 
Symbol 
ID3734717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp679340 
End bp681682 
Gene Length2343 bp 
Protein Length780 aa 
Translation table11 
GC content70% 
IMG OID637760811 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_366798 
Protein GI78060223 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.494922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCTC ACATGAAAAC CCACTACGCA CGGATGACAA GACTGGCAAG CAACGCGGCG 
CCGGCCCGGA ACCCGGAGCT GCTCGCGGCG CAATACCGGG TATTCGCCGG CCAGATCCCG
GTGTCGTACC TGATCCTGAT CTCGAGCACC TGGAGCCTCG CCATCACGCA CCTGCGCAGC
ACGCCGTGGT GGCTGTCGGT CGCGATCCCG GCCGCGATGA CGCTCGCGGC GCTGGCGCGG
CTGCTGCACT GGCACCGCAC CCGGCTGCTC GAGCCGACGC CGGACACCGT GATGCGCGCG
CTCACGGTCA CGAACTGGCT GGTGGTCCCG GTCGCCGTGA CGTTCACCAC CTGGGCGCTG
CTGCTGTTCC CGTACGGCGA CGCGTGGCAA AAGGCCCAGG TCGCGTTCTA CCTGGCGATC
ACGGTGATCG GCTGCATCTT CAGCCTGATG TACCTGCGCA CGGCTGCGCT GAGCGTGGCC
GTGATCGTCA ACGTCGCGTT CATCGTGTTC TTCATCTCGA CCGGCCAGCC GACGCTCGTC
GCCACCGCGG TCAACATGGC CTTCGTGTCG GCGGCGCTGA TCGCCGTCAT CTCGGTCAAC
TACCGCGGCT TCCTGCGCAC CGTCGATGCG CAGGCCGAAT CGCGGATGCG CGAGCAGGCG
CAGACGCGGC TGATGCGGAT GATCGACGAC ATGCCGGTGG CCGTGATGAC GGCCGACCCG
GAGACGTTCC GCATCAACTA CCTGAACGCA ACGTCGCGCA ACCTGCTGCG CACGATCGAG
CACCTGCTGC CGATTCGCGC GGACGATGCG CTCGGCGCGT CGATCGACTT CTTCCACCCG
CACCCGCAGC ACCAGCGCCG CCTGCTCGCC GATCCGGCGA ACCTGCCGCA TCGCGCGCGC
ATCGGGCTCG GGCCGGAAGT GCTCGACATC CAGGTCTCGG CCGTGCGCGA CGCCGACGGG
CGCTACATCG GCCCGATGCT GTCGTGGTCG ATCGTCACGC AGCAGGCCGA GGCGGAGGCG
CGCATCCACC AGCTCGCGCA TCACGATTCG CTCACGGGCC TGCCGAACCG CGCAACCTTT
CTGGCCGAAT TCGATGCGAG CCTGCGCCGC TCGGACAAGG TGCTCGGGCT GCTGTTCATC
GACCTCGACG GCTTCAAGCT GATCAACGAC GCGTGCGGGC ATTCGGCGGG CGACGAGGTG
CTGCGCCAGG TCGGGGAACG CCTGCGCGGG CAGTGCCCCG AGCCGGGGAT GATGCTCGGG
CGCATCGGCG GCGACGAATT CGCGGTGCTG CTGCGCGACA CCGACGCGGA CCGCGCGATG
GGCGCGGCCG CGCGGCTCGT CGACACGCTC GTTGCTCCCT ATGCACCGTC GCCCGACCGC
CAGTTCCGCA TCGGTGCGTC GATCGGCTGC GTGCTGGCGC CGGATCACGG CAACGACGGC
GGCGTGCTGC TGTCACGCGC GGACATGGCG CTCTATGCGG CCAAGAAAGC CGGGAAGGGC
ACCTACCGGA TGTTCTCGCC GGACATGGAA ACGAGCGCAC AGGAGCGGGT CGCGCTCGAA
TCGAAGCTGC GCGTCGCGCT GGACGAGAAC CAGGGGCTGT ACGTGTTCTA CCAGCCGATC
GTCGATGTCC GCACCCGCCA GATCACGACG CGCGAGGCGC TGCTGCGCTG GCATCACCCG
CGCGCCGGCT GGATTTCGCC GGGCCGCTTC ATTCCGGTGG CCGAGCGCGG CGGCCTGATC
GACCGGCTCG GCCGCTTCGT GCTCGAGCAG GCCTGCCGGG AGGCGGCGCG CTGGCCCGAC
GGCGCGCGCG TCGCCGTCAA CGTGTCGGCG GGGCAGCTCG GCCACGGCAC GATCGTGCCG
ACCTTCGCGG CCGCGCTGGC CGGCGCGGGG CTCACGCCCG ACCGGCTGGA AATCGAAGTG
ACGGAAACCG CGCTGCTGCA CGACGAGGGC AAGGCCATCG CGGACTTGCG CGCGCTGCGT
TCGATGGGCG TGCGTGTCGC CCTCGATGAC TTCGGCACGG GCTTCTCGTC GCTCGCGCAT
CTGCGCGCGT TCCCGTTCGA CAAGATCAAG ATCGACGGCA GCTTCGTGCG CGATGCGGTC
ACGCGCCCGG ACTGCGCAGC TGTCGTGCGC GCCGTTGCCG ATCTCGGCAA GCGTCTCGGC
GTGACGACTG TCGCGGAAGG CGTCGAGACG GAAGAGCAAC TGGCGTGCAT CACGGATGCC
GGCTGCCGCG AGGTGCAGGG CTTCCTGATC GGCAGGCCCG CGCCGGGCGA GCAGGATGCG
CCGGCCATCC GCTGGATCGA GCGGGCCGCG CTGGCGGCGC AGGCTACGGC CAGGCAGGCG
TAA
 
Protein sequence
MQAHMKTHYA RMTRLASNAA PARNPELLAA QYRVFAGQIP VSYLILISST WSLAITHLRS 
TPWWLSVAIP AAMTLAALAR LLHWHRTRLL EPTPDTVMRA LTVTNWLVVP VAVTFTTWAL
LLFPYGDAWQ KAQVAFYLAI TVIGCIFSLM YLRTAALSVA VIVNVAFIVF FISTGQPTLV
ATAVNMAFVS AALIAVISVN YRGFLRTVDA QAESRMREQA QTRLMRMIDD MPVAVMTADP
ETFRINYLNA TSRNLLRTIE HLLPIRADDA LGASIDFFHP HPQHQRRLLA DPANLPHRAR
IGLGPEVLDI QVSAVRDADG RYIGPMLSWS IVTQQAEAEA RIHQLAHHDS LTGLPNRATF
LAEFDASLRR SDKVLGLLFI DLDGFKLIND ACGHSAGDEV LRQVGERLRG QCPEPGMMLG
RIGGDEFAVL LRDTDADRAM GAAARLVDTL VAPYAPSPDR QFRIGASIGC VLAPDHGNDG
GVLLSRADMA LYAAKKAGKG TYRMFSPDME TSAQERVALE SKLRVALDEN QGLYVFYQPI
VDVRTRQITT REALLRWHHP RAGWISPGRF IPVAERGGLI DRLGRFVLEQ ACREAARWPD
GARVAVNVSA GQLGHGTIVP TFAAALAGAG LTPDRLEIEV TETALLHDEG KAIADLRALR
SMGVRVALDD FGTGFSSLAH LRAFPFDKIK IDGSFVRDAV TRPDCAAVVR AVADLGKRLG
VTTVAEGVET EEQLACITDA GCREVQGFLI GRPAPGEQDA PAIRWIERAA LAAQATARQA