| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C7094 |
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| Symbol | |
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| ID | 3734663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007509 |
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| Strand | - |
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| Start bp | 659041 |
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| End bp | 661074 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637760795 |
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| Product | sigma 70 (RpoD) |
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| Protein accession | YP_366782 |
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| Protein GI | 78060207 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.678093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCGA CGATCGTTGG CTCATCTGCT GAGGAGCATG TATTGGCAAT TTCTGATCGG
AACGATTCCA CCTCCCCGGA AGTCACGGCC ACGGCAAAAG CCGGCCGCCG TGCGTCGAAG
GGTAAGGCCC AGGCTCAGGC CCTGACACCG ACGGACATCG CGTCCTTGGC GCGCCAGAAT
GAGGAACGCC AGCGCCAGAT GCGCGCGTTG ATCGCGCTCG GTCGCGAGCG CGGCTATCTC
ACCCACGCGG ACATCAACGA TCACCTGCCG GACAACTTTG CCCAAACGGC GGCGATGGAC
ACCATCGTCA GCACGTTCAG CGACATGGGC GTGGCGGTGT ACGAACAAGC GCCGGACGCC
GAAGCGCTCC TGCTCACCGA AGCTGCGCCG GCCGTGGCAT CCGACGATCA GGCGGACGAG
GAGGCGGAAG CTGCGTTATC GACTGTCGAT TCCGAATTCG GCCGCACCAC GGATCCGGTT
CGGATGTACA TGCGTGAAAT GGGGGCCAGC GAACTGCTGA CCCGCGCCGG TGAAATCGAG
GTCGCGAAAC GGATCGAAGA CGGTCTGCAG GACATGATTC AAGCGATTGC CGCATGTCCG
TCGATCGTGT CCACCATTCT CGCCGATGTC GACCGCATCG TAGCCGGCGA ACTGCGCATA
GACGAACTGG TCGATGGCAT CAGTGTCGAC ACCGATGAAA GCGAAATGAC GCCGGAGTCC
CAGGAAGAGG AGGCGGAAGT GCTCGCCGCC GATGACGATT CGGACGAAGA CGACGTCGAA
ACGGACGCCG GGGATTCGGA GAAGGTGAAC GCGGCACGCC TCGAAGAACT CACGAACGAC
AGTCTCGTGA TTTTCGCGCG CGTGCGTGCA CTGTTCGAGC AGTTGCCGGA TGTGCCTGTC
ACTGGCGAAG CCCGTTCCGC AGCCGCCGCG CAGGTGCGCG CGGCGATCCA GCGTGAACTC
GCGCCGATCC GCTTTACCGC CAAGACCATC GACCGCCTTT GCGAGATCGT GCATGGGCAA
GTGACTGAGG TTCGCGCGAT CGAGCGCAGC GTTCTGGCGA TTGCCGTCGA CCGTTGCGGC
ATGCCGCGCG ACGCGTTTGT CGAGTCGTTC CCGGGCCACG AGACCGACCT CGATTGGACG
AGCCGCACGG CGGCAACCTC GCAGCAGTTT GGCGCGGCGC TCGAGCGACA TCAACCGGCG
ATTCAGGCGG CGCAGCAGAA ACTCGTCGAC ATCGAGTCCC GGGTCTCGTT GCCGCTCCAG
CAGCTCAAGC AGATCAACCG CCAGATGAGC GCCGCGGAAC TGAAAATGCG GCAGGCCAAG
CGCGAGATGA TCGAGGCGAA CCTTCGCCTT GTCATTTCAA TCGCCAAGAA ATACGTGAAC
CGCGGCATGC AGTTCCTGGA TTTGATCCAG GAGGGCAATA TCGGCCTGAT GAAGGCCGTG
GACAAGTTCG AATACCGGCG CGGCTGGAAG TTCTCGACCT ACGCGACCTG GTGGGTCCGG
CAGGCTGTCA CGCGTGCGCT CGCCGATCAG GCGCGGACCA TTCGCGTGCC GGTCCACATG
ATCGAGACGA TCAACAAGCT GAACCGGATA TCGCGCGAGA TCTTGCAACA GACAGGGCAG
GAAGCGCATC CCGCAGTGCT GGCAAAGCGC ATGGAGATGT CCGAGGAGAA AGTGCGCAGT
ATCCTCAAGA TCGCCAAGCA ACCTGTCTCG CTCGAAACCC CGGTAGGTGA CGACGCCGAC
GCAACGCTCG GCGACATGAT CGAGGATGTC TCGGCGAGTT CACCGGCCGA GGCGGCGATT
CACGCGAACA TGCGCGCGGC GATCGACGAG GCACTCAACG GGTTGTCGCC GCGCGAGGCC
AAGGTTCTGC GGATGCGATT CGGGCTTGAC ACGAACTCCG ATCACACGCT TGAAGAGGTT
GGCAAGCAGT TCGACGTGAC TCGCGAGCGA ATCCGTCAGA TTGAGAGCAA GGCGATGCGC
AAGCTGATGC ATCCCAGCCG TGCAGACAAG CTCAGGCCCT TTCTTGAGCG CTGA
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| Protein sequence | MLATIVGSSA EEHVLAISDR NDSTSPEVTA TAKAGRRASK GKAQAQALTP TDIASLARQN
EERQRQMRAL IALGRERGYL THADINDHLP DNFAQTAAMD TIVSTFSDMG VAVYEQAPDA
EALLLTEAAP AVASDDQADE EAEAALSTVD SEFGRTTDPV RMYMREMGAS ELLTRAGEIE
VAKRIEDGLQ DMIQAIAACP SIVSTILADV DRIVAGELRI DELVDGISVD TDESEMTPES
QEEEAEVLAA DDDSDEDDVE TDAGDSEKVN AARLEELTND SLVIFARVRA LFEQLPDVPV
TGEARSAAAA QVRAAIQREL APIRFTAKTI DRLCEIVHGQ VTEVRAIERS VLAIAVDRCG
MPRDAFVESF PGHETDLDWT SRTAATSQQF GAALERHQPA IQAAQQKLVD IESRVSLPLQ
QLKQINRQMS AAELKMRQAK REMIEANLRL VISIAKKYVN RGMQFLDLIQ EGNIGLMKAV
DKFEYRRGWK FSTYATWWVR QAVTRALADQ ARTIRVPVHM IETINKLNRI SREILQQTGQ
EAHPAVLAKR MEMSEEKVRS ILKIAKQPVS LETPVGDDAD ATLGDMIEDV SASSPAEAAI
HANMRAAIDE ALNGLSPREA KVLRMRFGLD TNSDHTLEEV GKQFDVTRER IRQIESKAMR
KLMHPSRADK LRPFLER
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