| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C7058 |
|---|
| Symbol | |
|---|
| ID | 3734627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007509 |
|---|
| Strand | - |
|---|
| Start bp | 625235 |
|---|
| End bp | 625777 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637760760 |
|---|
| Product | alkylhydroperoxidase-like protein |
|---|
| Protein accession | YP_366747 |
|---|
| Protein GI | 78060172 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.328149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.127089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCA TCGCCATCCC CGCCATCGAA ACCGCCACCG GCGCAACCGC CGACGTGTAC
GCACAAGTCC GCAAGGTCGC CGGCGGCACC GTCCCCAACC TGTTCGCCGC CGTCGGCCAC
CTCGCGCCGA ACGCGCTCGC GGCTGTGCTC AATGCCGAAG GCGTGCTCGC CGGCGGCACG
CTGAGCAAGC AGGATCTCGA AACGATCAAG CTGCTCGTCA GCGCCGACAC CGGGTGTGAC
TACTGCGTCG CCGCGCACAA CCTGCTCGGC AAGATGACGG GCCTGTCGGC CGACGCGCTG
CGCGCGATCC GTTCGAGCGA GCCGAACACC GGCGACGCGA AGCGCGACGC ACTGATCCGC
TTCGTGCTGA ACCTGCAACG CACGAGCGGC ACGATCACCG ACGACGAATT CGCGGCGATC
CGCGAAGCCG GCTACACGGA CACGCAACTC GCGGAAATCT CGCTCACGAT CGCGCTGACG
ATCTTCACCA ACACGTTCAA CCGCATCAAC GACACGGTCG TCGATTTCCC GCCCGTGAAG
TAA
|
|---|
| Protein sequence | MSRIAIPAIE TATGATADVY AQVRKVAGGT VPNLFAAVGH LAPNALAAVL NAEGVLAGGT
LSKQDLETIK LLVSADTGCD YCVAAHNLLG KMTGLSADAL RAIRSSEPNT GDAKRDALIR
FVLNLQRTSG TITDDEFAAI REAGYTDTQL AEISLTIALT IFTNTFNRIN DTVVDFPPVK
|
|---|
| |