Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_C7031 |
Symbol | |
ID | 3734483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007509 |
Strand | - |
Start bp | 591341 |
End bp | 593467 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637760733 |
Product | glycogen debranching protein GlgX |
Protein accession | YP_366720 |
Protein GI | 78060145 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.261677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCG CCCTGCCCGC CCGTCTCGAA TCCGGCCGCA GCTACCCGCT CGGCGCGACC TGGGACGGCC TCGGGACCAA CTTCGCGGTA TTTTCCGCAC ACGCGCAGCG CATCCAGCTG TGCGTGTTCG ATCCGACCGG CCGCAAGGAG CTCGCGCGCC TCGACCTGCC CGAATGCACC GACGAGGTGT GGCACGGCTA CCTGCCCAAC GCGCATCCGG GCACCGTGTA CGGGTTCCGC GCGGACGGCC CGTACCAGCC GCAGCACGGC CATCGCTTCA ACCCGACCAA GCTGCTGCTC GACCCGTACG CGCGCAAGCT GGTCGGCCAG TTCCGCTGGT CGGACGCGCT GTTCGGCTAT CGCGTCCATT CGAGCCGCGC GGACCTGTCG ATGGACCGCC GCGACTCGGC CCCCGCGATG CCGAAGTGCG TGGTGGTCGA CGAGGCGTTC GACTGGCGCA ACGACCGGCG CCCGCGCGTG TCGTGGCGCA ACACGGTGAT CTACGAGACC CACGTGCGCG GCGCGTCGAT GCGCCGCGCC GGGTTGCGCC CGCCCGAACG CGGCACGTTC GCGGCGTTCG CGCATCCGGC GTTCATCGAT CACCTGCTGT CGATCGGCGT GACGACGGTC GAGCTGCTGC CCGTCCACGC GTTCCTGCAG CAGCGCGCGC TCGTGAACCG CGGGCTGCGC AACTACTGGG GCTACGACAC GGCTGCATTC TTTGCGCCGG AGCCCGCGTA TCTCGCGACG CGGCGGCTCG ACGAGATACG CATCGCGATC CGCCAGCTGC ATGCGGCTGG CATCGAGGTC GTGCTGGACG TCGTCTACAA CCATACGTGC GAGGGCAACG AGCTCGGACC GACGCTGTCG TGGCGCGGCC TCGACAATGC GAGCTACTAC CGGCTGATGC CGGACGACCA CCGCTTTCAT GTCGACGAGA CCGGCTGCGG CAACACGCTG AACCTGTCGC ATCCGCGCGT CGTGCAGATG GTGATGGATT CGCTGCGCTA CTGGGCCACC GCGTTCAACG TCGACGGCTT CCGTTTCGAC CTCGGCGTAA CGCTGGGCCG CGAGGAACAT GGCTTCGATC CGGGCGCGGG GTTTTTCGAC GCGTTGCGGC AGGACCCGGT GCTCGCGCAG CGCAAGCTGA TCACCGAGCC GTGGGATCTC GGCCCCGGCG GCTACCAGCT CGGCCGCCAC CCGCCCGGTT TCGCCGAGTG GAACGACCGC TTTCGCGACA CCGTGCGGCG CTTCTGGCGT GGCGACGCGG GCCAGCGGCC CGAGCTCGCC GCACGCCTCG CCGGGTCGGC CGACCTGTTC AACCACCAGC GGCGCCACAC GTGGGCGTCG GTCAATTTCG TCACCGCGCA TGACGGGTTC ACGCTCGCCG ATCTCGTGTC GTATTCGGCG AAACACAACG ACGCGAACGG CGAGGACAAC CGCGACGGCC GCGACGACAA CTGCAGCGCG AACTGGGGCG TCGAAGGGCC GAGCGACGAT GCGGCGATCC GTGCGGTGCG CGCGCGCGTC GCCCGCTCGA TGCTCGCGAC GCTGTTTACC GCGCTCGGCA CGCCGATGCT GGTGGCCGGC GACGAGTTCG GCCGCACGCA GCACGGCAAC AACAACGCGT ACTGCCAGGA CAACGAGCTG TCATGGCTCG ACTGGGATCT GGCGCGCAGC GACGAAGCGG TGACGCTGAT GCGCTTCGTG TCGCGGCTCG CCGCGCTGCG GCGCATGTAT CCGGTGATGT CCACGCCGCG CTATCCGTCG GGCGACCGCG ACGCCGCGCC GGGCATGGCC GAGATCGACT GGTTCGACGA GCGCGGCGAC GCGATGACCG TGCCCGCGTG GCAGGACCGC GAGCGCCGCG CGCTGACGAT GCGGCGCGTC GGCACAGGCC GCACCGGGCG CACCGAGGCG CTGCTCGTGA TGCTGAACGC GTCGTCCGAG ACGGTCGTGT TCGCGCCGCC CGCGCCGGTA CTCGACTATC GCGTGCTGGT CGACACGGCC ACACCGGACG CCGGCCCGCG CGCCTGGCCG GCCGACGGGC TCGACGTCGC CGCGCACGCA GCCGCGATCG CGGTGGCCGC CGTGCCGCCC GACCTGCATT CGGGAGACTC GCCATGA
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Protein sequence | MPTALPARLE SGRSYPLGAT WDGLGTNFAV FSAHAQRIQL CVFDPTGRKE LARLDLPECT DEVWHGYLPN AHPGTVYGFR ADGPYQPQHG HRFNPTKLLL DPYARKLVGQ FRWSDALFGY RVHSSRADLS MDRRDSAPAM PKCVVVDEAF DWRNDRRPRV SWRNTVIYET HVRGASMRRA GLRPPERGTF AAFAHPAFID HLLSIGVTTV ELLPVHAFLQ QRALVNRGLR NYWGYDTAAF FAPEPAYLAT RRLDEIRIAI RQLHAAGIEV VLDVVYNHTC EGNELGPTLS WRGLDNASYY RLMPDDHRFH VDETGCGNTL NLSHPRVVQM VMDSLRYWAT AFNVDGFRFD LGVTLGREEH GFDPGAGFFD ALRQDPVLAQ RKLITEPWDL GPGGYQLGRH PPGFAEWNDR FRDTVRRFWR GDAGQRPELA ARLAGSADLF NHQRRHTWAS VNFVTAHDGF TLADLVSYSA KHNDANGEDN RDGRDDNCSA NWGVEGPSDD AAIRAVRARV ARSMLATLFT ALGTPMLVAG DEFGRTQHGN NNAYCQDNEL SWLDWDLARS DEAVTLMRFV SRLAALRRMY PVMSTPRYPS GDRDAAPGMA EIDWFDERGD AMTVPAWQDR ERRALTMRRV GTGRTGRTEA LLVMLNASSE TVVFAPPAPV LDYRVLVDTA TPDAGPRAWP ADGLDVAAHA AAIAVAAVPP DLHSGDSP
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