Gene Bcep18194_C6959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C6959 
Symbol 
ID3734362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp518462 
End bp519901 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content68% 
IMG OID637760662 
Productmajor facilitator transporter 
Protein accessionYP_366649 
Protein GI78060074 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAGA CCGTCACCGC GGGCGGCGCC CCGCTCGATA CGCCGCAGGT ACGCGCCGGC 
ATCCGCGCCG GCGCGGACAT CTCCGCGCGC ATGGACCGGC TGCCGATCAC GCGGCACCAG
TGGATGCTCG TGCTGCTGAT TTCCCTCGGC GGCTTCTTCG AAGTCTACGA CCTGATCTTC
ACTGGCTACA TCGCACCGGG CATGGCAAAA AGCGGCCTGC TGCAGACCAC CACGCAGGCA
TTCTTCGGCT TCACCGGCAT CGCCGCCTTC ATCGCGGCGA CCTTCGCGGG GCTGTTCGTC
GGCACGTTCG GCTTCGGCTG GATGCCGGAC CGCTACGGGC GCCGCGCCGT CTTCACGTAC
TCGCTGCTGT GGTACTCGAT CGGCTCGGCC ATCATGGCGT TCCAGACGAC GCCCGAGGGC
GTGCTGTTGT GGCGCTTCAT CACCGGCATC GGCGTCGGGC TCGAGATCGT CACGATCGAC
ACCTACGTGA CCGAACTCGT CCCGCAGCAC ATGCGGGGCC GCGCGATCGC GTTCAACCAG
GTCGTGATGT TCGCCGCCGC GCCGGTCGCG GCGATCCTGT CGTGGTGGCT CGTGCCCACG
ACGGTATTCG GGCTCGACGG CTGGCGCGTC GTGGTGCTGG CCGGCTCGGC CGGCGCCGTG
ATCGTCTGGT TCATCCGTCG TGCGGTACCC GAAAGCCCAC GGTGGCTGGC CGCGCACGGC
GATGCCGAAC GAAGCGAACG GATCGTGAGC CGGATGGAAG CGATCGCCGA GCGCGAATCG
GGCATGCCGC TGCCGCCGCC CGCGCCGGCA AGCGAGGCTC CCGAAGTACA CCGCGCGGCG
TTCGCAGCAT TGTGGCGCGC ACCCTATCGC GCCCGCCTGC TGATGCTCGT CGCGTTCAAC
TTCTGCCAGG CCATCGGCTA CTACGGATTC GCGAACTGGG TGCCGACACT GTTGATCGGC
CAGGGCATCA CCGTCACGAA GAGCCTGTTG TATGCGTTCG TCATCGCATT CGCGATGCCG
GCCGGGCCGC TGCTCGCGAT GCGCTATGCG GACCGGATCC AGCGCAAGCA CCTGATCGTC
GGCGGTGCGC TGGCCGTGAT CGCCTGCGGG CTCGCGTTCG CGCAGGTCAA GACCGTTGCG
CCGCTCATCG TGCTCGGCGT GCTGATCAGC CTCGCCGGGC AGACGATCTC CGTCGCCTAT
CACGCGTACC AGTGCGAGCT GTTTCCGACC GAGGTGCGCT CCCGCGCGAG CGGCATCGCG
TATTCGGCCA GCCGCGCCGG CGCGATGATG TCGGGCTTCA TCATCGCGGC GCTGCTGAAG
GATTTCGGCG TGTCCGGCGT GTTCACCGGG ATCACCGTGT TCATGCTCGT CGTGGTCATC
GTCATCGGCA CGTTCGGCCC GAGGACCAAC GGCGTGCGGC TCGAGGAGCT CAATCGCTGA
 
Protein sequence
MHQTVTAGGA PLDTPQVRAG IRAGADISAR MDRLPITRHQ WMLVLLISLG GFFEVYDLIF 
TGYIAPGMAK SGLLQTTTQA FFGFTGIAAF IAATFAGLFV GTFGFGWMPD RYGRRAVFTY
SLLWYSIGSA IMAFQTTPEG VLLWRFITGI GVGLEIVTID TYVTELVPQH MRGRAIAFNQ
VVMFAAAPVA AILSWWLVPT TVFGLDGWRV VVLAGSAGAV IVWFIRRAVP ESPRWLAAHG
DAERSERIVS RMEAIAERES GMPLPPPAPA SEAPEVHRAA FAALWRAPYR ARLLMLVAFN
FCQAIGYYGF ANWVPTLLIG QGITVTKSLL YAFVIAFAMP AGPLLAMRYA DRIQRKHLIV
GGALAVIACG LAFAQVKTVA PLIVLGVLIS LAGQTISVAY HAYQCELFPT EVRSRASGIA
YSASRAGAMM SGFIIAALLK DFGVSGVFTG ITVFMLVVVI VIGTFGPRTN GVRLEELNR