| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C6853 |
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| Symbol | |
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| ID | 3734177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007509 |
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| Strand | - |
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| Start bp | 395766 |
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| End bp | 397241 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637760556 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_366543 |
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| Protein GI | 78059968 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.851364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATGCC CGTTTCCTCC TTCACGCTTG ACGTGCCGCG CGCGCGCCTT CATCGCGGCC
TGCACGTGCG CGCTGGCTGC ATGCACGACG GTCGGCCCTG ATTACGTGTC GCCGCAGTCC
ACGCATCCGC CCTCCTGGAG CGCACCGCGC GACACGGTGA CCACCGATCC CGCGCAGTTG
CAGAACTGGT GGCGCACGTT CGGCGACACG CAACTCGATG CGCTGGTCGA ACAGGCGATC
GCGCACAACC AGGATCTCGC GATCGCGCGC CAGCGGCTGC TGCAGGCGCG CGCCGAACGC
GACCAGATCG CGAGCCGCCT CGGCCCGACC GTCACCGCCG GCGGAAATGC CGATGCGTTG
CGCTCGTCAC GGGCGCTCGA CTGGCCCCCA GGCATCGGCC AGTCGCGCAC CTACCGGCTC
GGCTTCGACG CGTCCTGGGA ACTCGACCTG TTCGGCGGCA CGCGGCGTGC GGTCGAATCG
GCCGATGCGC AGCTCGATGC GCTCGACGAC GATCGCCACG CGATCCTCGT GAGCCTGCTG
GCCGAGCTCG CGTCGGACTA CGCAGCGTTG CGCGCGACCC AGGAGCGGCT GCGAATCGCG
ACGGACAACG TCGCGAGCCT CGACGCCACG CGGCGGCTGA CCGAGCAATC GAACCGGCGC
GGCCTAGGCA CGTCGTTCGC GGTCGCGCAG GCGCGTGCCG AACTGCAGCT CGCGCAGGCA
ACGTTGCCGC CGCTGCATCA GGACGTCGCG CGGTTCGCCC ACGCGATCGG CGTGCTCGTC
GGCGGTTTTC CGGAAACGCT GCGCGACACG CTGAGCGCGC CCGGCGCGAC ATTGCCGGTC
GCGCCCGCCC TGCCCGTCAC GTTGCCGTCG GACGTGATCC GCGAGCGCCC CGACATCCGC
GCCGCCGAAC GGCGGCTTGC CGCCGCGACC GCGCAGATCG GCGTCGCGCG CGCCGAGCAG
TTTCCGCATT TCGCGATTCC GCTGAGCCTC GGCACGACGG CAAGCCTCGT GCAGGACCTG
TTCTCGGGCG CGAGCGTCGC GTGGTCGGTC GCGCTCGACG GCACTCAGAC GCTGTACGAC
GGCGGCCGTG CGAAAGCCGG CGTCGACGCC GCCCGCGCGG CGGCCGAGGC CGCCCGGCTG
GCATACGAGC AGCGCATTCG CAGCGCATTT CGCGATGTCG AGGACGCGCT GGTGGCGATC
GGCGCCGCGC GCGACCAGCA GGCCATGCTC GCCGCGGCGG TCGACAGCAG CCAGGATGCG
CAGTCGCGTG CGACGCGGCT GTACCGCAAC GGCCTCGGCG AATACCTGTC GGTGCTCACC
GCACAGCGCG CGACGTACCG CGCCCGCGAT GCGCTTGCCC TCAGCCGGCT CGCGCAGGTG
CAAGGCGCGA TCGCGCTCTA CAAGTCGCTC GGCGTCGGCT GGCGCGATGC GCCGCCGCTC
GCGCAGGCCG GCGCGCCGCG AGCGAACGCG CATTGA
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| Protein sequence | MRCPFPPSRL TCRARAFIAA CTCALAACTT VGPDYVSPQS THPPSWSAPR DTVTTDPAQL
QNWWRTFGDT QLDALVEQAI AHNQDLAIAR QRLLQARAER DQIASRLGPT VTAGGNADAL
RSSRALDWPP GIGQSRTYRL GFDASWELDL FGGTRRAVES ADAQLDALDD DRHAILVSLL
AELASDYAAL RATQERLRIA TDNVASLDAT RRLTEQSNRR GLGTSFAVAQ ARAELQLAQA
TLPPLHQDVA RFAHAIGVLV GGFPETLRDT LSAPGATLPV APALPVTLPS DVIRERPDIR
AAERRLAAAT AQIGVARAEQ FPHFAIPLSL GTTASLVQDL FSGASVAWSV ALDGTQTLYD
GGRAKAGVDA ARAAAEAARL AYEQRIRSAF RDVEDALVAI GAARDQQAML AAAVDSSQDA
QSRATRLYRN GLGEYLSVLT AQRATYRARD ALALSRLAQV QGAIALYKSL GVGWRDAPPL
AQAGAPRANA H
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