| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C6844 |
|---|
| Symbol | |
|---|
| ID | 3734109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007509 |
|---|
| Strand | - |
|---|
| Start bp | 384387 |
|---|
| End bp | 385571 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637760547 |
|---|
| Product | putative regulator of polyketide synthase expression |
|---|
| Protein accession | YP_366534 |
|---|
| Protein GI | 78059959 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2508] Regulator of polyketide synthase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.222986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.342392 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAGG GTGCCGAAAT CGCACTGAAT GTACAGACGG AATGGCTGCA GGAACTCGAC
AAGGAAAACG TCGCGACCAG CCCGACGATG AGCGACCCCG TGCTCGCCGC GGCCGTGCGG
CGAATCAACC GCAACGGGCT GATCCACTGG GCCACCGCCA ACCTGGAGAA CCCTTGCGCG
CCGGTGTCCC GCTTTCTTTC GGCAGATATG CTAAGCAGTG CGCAGGAACT GGTGCGCCGC
GGCCTCACCG ACCTCGTGTT CGTCGCCGCC CGTTCGTCGC AGAGCGTGGT GTGGCAACGC
TGGATGGACC TCGCGTTTAC GCTGACGCAG GACCCGGTCG AGCTGCGCGA GTTTCTGGCC
GTATCGTCGC GTTCGATCGC GGCCTTCATC GACACCAACA TGGTCGGCAT GGCCGAATTC
ATGCGCGCCG AGCGTGAAGC GCGGTTGCGC GGCACGCACG CCGATCGCCG CGAACTGGTC
ACGCAGATCG TCGAAGGGAC GACCATCGGC GCGCAGGAAG CCAGCCGGCG GCTGGGCTAC
ACGCTGGAGC AACGCCATCA CGCCGCAATC GTCTGGAGCG AGGAAGCGGA TATCGAACTG
GGGTTGCTGG AGCGGGCGGC CGATGCGCTG GCGCAATGTG CGGGCACGCG CAATGCCCTG
GTCGTCGTCG CGAACACGGC CACGCTGTGG GTCTGGACGT ATCACGACGG CAAACCGCTC
GACATGCCTT CGCTGCAGCG TGCGATCAAC GCGCTGCCCG GCGTGCACAT GGCTGTCGCG
ACCGCCGGGA GCGGCATGGA AGGATTCCGC CACGGCCACC TGGACGCACT CGCGACACAA
CGGCTGCTCG GCAGGCTGCA CGCCGGCGTC GGCGTGGTGC ATGCGGACAG CATGAGCCTG
ATCGCGCTGA TGACCAATCA TATGGAATCC CTCCAGCAGT TCGTGACCAA CACGCTGGGC
AACCTGGCCA GCGCCGACAA GTCGCTGCGC GACGCGCTGC GCGCGTTTCT CGCGGAAGGC
TGCAGCGTGA CCGACGCAGC CGAGAAAACC CACGTCCACC GCAACACGCT GCTGCGCCGG
CTCGAGCGCG CCGAGTCGTT GCTGCCGCGC CCGCTCGCGC AGCAGCGCCT GCACGTCGCG
GCCGCGCTGG AAGTGCTGCA CTGGATCGCC AGCGATCCGA ATTGA
|
|---|
| Protein sequence | MRQGAEIALN VQTEWLQELD KENVATSPTM SDPVLAAAVR RINRNGLIHW ATANLENPCA
PVSRFLSADM LSSAQELVRR GLTDLVFVAA RSSQSVVWQR WMDLAFTLTQ DPVELREFLA
VSSRSIAAFI DTNMVGMAEF MRAEREARLR GTHADRRELV TQIVEGTTIG AQEASRRLGY
TLEQRHHAAI VWSEEADIEL GLLERAADAL AQCAGTRNAL VVVANTATLW VWTYHDGKPL
DMPSLQRAIN ALPGVHMAVA TAGSGMEGFR HGHLDALATQ RLLGRLHAGV GVVHADSMSL
IALMTNHMES LQQFVTNTLG NLASADKSLR DALRAFLAEG CSVTDAAEKT HVHRNTLLRR
LERAESLLPR PLAQQRLHVA AALEVLHWIA SDPN
|
|---|
| |