| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C6824 |
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| Symbol | |
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| ID | 3734069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007509 |
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| Strand | - |
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| Start bp | 357608 |
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| End bp | 360751 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637760527 |
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| Product | hydrophobe/amphiphile efflux pump |
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| Protein accession | YP_366514 |
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| Protein GI | 78059939 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.78636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.200306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAT TCTTCATCCG GCGCCCGGTC TTCGCGTGGG TGATCGCCCT CTTCATCATC
CTGCTGGGCC TGATCGCCAT CCCCGAACTG CCGGTTGCGC GCTACCCGTC GGTCGCGCCG
CCGACCGTCA CCATTACCGC CACCTACCCG GGCGCCACGC CGCAAACGAT GACCGACAGC
GTGCTGAGCC TCATCGAGCG CGAGCTGTCC GGCGTCCGGA ACCTGCTGTA CTTCGAATCG
GCGTCGGATA CCTCCGGCCA GGCGAAGATC ACCGCGACCT TCAAGCCCGG CACCGATTCG
GCGATGGCGC AGGTCGAAGT GCAGAACAAG CTCAAGTCGG TCGAACCGCG CCTGCCGCCC
GTCGTGCGGC AAAACGGCGT GATCGTCGAG TCTGCCTCCA CCGGCTTCCT GTTGTTCGTC
GGCCTGAAGT CGGAAAGCGG CCGCTATGAC GAAAACGCGC TGGCCGACTA CATGGCGCGC
AACGTCGTCG AGGATCTGCG ACGTGTCGAA GGCGTCGGCA AGGTGCAGCT GTTCGGTTCC
GAACAGGCGA TGCGCATCTG GGTCGATCCG CAGAAGCTGA TCACCTACGG CCTGTCGATG
AACGACCTGA CGACGGCCGT CGCCCAGCAG AACGTGCAGA TCGCCCCGGG CAGCCTCGGT
GCGGCGCCCG CGCTGCCGGG CCAGCGCGTG ACGGTCCCGC TCACCGCGCA AGGCCAGCTC
ACGTCGCCCG AGCAGTTCGC GAAGATCGTG CTGCGCGCGA ACGCGAACGG CTCGAAGGTC
GTGCTCGGCG ATGTCGCACG GGTCGAACTC GGCCCGCAGT CGTTCACCTT CGTCAACAGC
GAGAACGGCA AACCCGCCAC CTTCGCCGGC GTGCAGCTGG CGCCGGGTGC CAACGCGGTG
AAGACCGCCG AGGCCGTGCG CGAGCAACTG GACATGATCG CCAAGACGAT GCCGGCCGGC
ATGACCTACT CGATCCCGTT CGATACCGCA CCGTTCGTGA AGATCTCGAT CGAGAAGGTG
ATTCACACGC TGATCGAAGC GATGGTGCTC GTGTTCCTGG TGATGTACCT GTTCCTGCAG
AACGTGCGCT ACACGCTGAT CCCGGCAATC GTCGCGCCGG TGGCGATGCT CGGCACCTTC
ACGGTCATGC TGTTGACAGG CTTCTCGATC AACGTGCTGA CGATGTTCGG CATGGTGCTC
GCGATCGGCA TCATCGTCGA CGATGCAATC GTCGTCGTGG AGAACGTCGA ACGCCTGATG
GTGGAAGAAG GCCTGTCGCC GAAGGACGCG ACGATCAAGG CCATGAAGGA AATCACCGGC
GCCATCATCG GCATCACGCT GGTGCTGACG GCCGTGTTCC TGCCGATGGC GATGTCGAGC
GGTTCGGTCG GCGTGATCTA TCAGCAGTTC ACGATGTCGA TGGCCGTGTC GATCATGTTC
TCGGCCCTGC TCGCACTGAC GCTGACGCCG GCCCTGTGCG CGACGATGCT CAAGCCGGTC
GAGCATGGCC ACCACGAGAA GCGCGGCTTC TTCGGCTGGT TCAACCGCCG CTTCGACCGC
ATGACGAACT GGTACGAAAC GCGCGTCGGC AAGCTGGTCG GCCGCACGGG CCGCGTGATG
CTGCTGTTCG TCGCGATTTC CACCGCGCTG GTGTTCGGCT TCCGCATGCT GCCGTCGTCG
TTCCTGCCCG AGGAAGACCA GGGCTACTTC ATGACCGGCT TCCTGCTCCC GTCGGATTCG
ACCGTCGAGC GCACGGGCGA CGTGGTCAAG ACCCTCGAGA AGCATCTCGC ATCGCGCCCG
GGCATCGAGT CGAGCATCTC CATTATCGGC TACGGCTTCT CCGGCCTCGG CTCCAACGCG
GCACTGAACT ACGCGGTGCT CAAGGACTGG GACAAGCGCG AAGGGGCAAC CGCGATGGAC
GAAGCGATGC GCGCGCAGGC TGCGATGGGC GGCGTGACGG AAGGCACGGT CATGAGCCTG
TTGCCGCCCG CGATCGACGG GCTGGGCACC AGCTCGGGCT TCACGATGCG CCTGCAGGAT
CGCGCGAACC AGGGCTACGC AGCACTCAAG GCGGCTGAAG CCAAGCTGCT CGAACTGGCC
GCGCAAAGCA AGGTGGTGAC CGGCGTCTAT CCGGACAGCC TGCCGGCCGG CACGAGCGTG
AAGCTGGACA TCGACCGTGA GAAGGCCGAA GCACTCGGCG TGTCGTTCAC GACCATCAGC
GACACGCTGT CGGCCGCGAT GGGTTCGACC TACGTGAACG ACTTCCCGAA CGCGGGCCGC
ATGCAGCAGG TGATCATCCA GGCCGATGCG CCGGCACGCA TGCAGATCGA GAACGTGATG
AAGCTCTACG TGCGCAACGC GACCGGCGGC ATGGTGCCGC TGTCCGAAGT GGTGCGTCCG
GTCTGGTCGG AAACCCCGCT GCAGCTGGTG CGCTTCCAGG GTTACCCGTC TGCACGTATC
TCCGGCGGCT CGGCCCCCGG CTACTCCAGC GGCGCGGCCA TGGCCGAGAT GGAACATCTG
GCTGCGCAAT TGCCGCCGGG CTTCACCGTG GCGTGGACCG GCCAGTCGCT GCAGGAGCGT
GAGTCGGCTT CGCAGGCGCC GATGCTGATG GCGCTGTCGA TGGTCGTCGT GTTCCTGGTG
CTCGCGGCGC TGTACGAGAG CTGGGCGATT CCGCTGTCGG TGATGCTGGT GGTGCCGCTC
GGCCTGATCG GCGCACTCGG CGCGGTGATG TTGCGCGGGA TGCCGAACGA CGTGTTCTTC
AAGGTCGGGA TGATTACCGT GATCGGCCTG TCGGCGAAGA ACGCGATCCT GATCGTGGAG
GTCGCGAAGC AGTTGCGCGA GGAAGGCATG GGGCTGATCG AGTCGGCCGT GCAGGCATCC
AAGCTGCGTC TGCGCCCGAT CCTGATGACC TCGCTCGCGT TCGGCCTCGG CGTCGTACCG
CTGATGATCG CGACCGGCGC AAGCGCCGAA ACGCAGCACG CGATCGGCAC CGGCGTGTTC
GGCGGGATGG TGACCGCCAC CGTGCTGGCC ATTTTCTTCG TTCCGGTTTT CTACGTGTTC
GTGATGAGCA TCCAGGAACG CATCTCGGCA TGGCGCGCGT CCGGCAAGAA GCCCGCCACC
GTGACCCACG AACATGAAGG TTGA
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| Protein sequence | MSQFFIRRPV FAWVIALFII LLGLIAIPEL PVARYPSVAP PTVTITATYP GATPQTMTDS
VLSLIERELS GVRNLLYFES ASDTSGQAKI TATFKPGTDS AMAQVEVQNK LKSVEPRLPP
VVRQNGVIVE SASTGFLLFV GLKSESGRYD ENALADYMAR NVVEDLRRVE GVGKVQLFGS
EQAMRIWVDP QKLITYGLSM NDLTTAVAQQ NVQIAPGSLG AAPALPGQRV TVPLTAQGQL
TSPEQFAKIV LRANANGSKV VLGDVARVEL GPQSFTFVNS ENGKPATFAG VQLAPGANAV
KTAEAVREQL DMIAKTMPAG MTYSIPFDTA PFVKISIEKV IHTLIEAMVL VFLVMYLFLQ
NVRYTLIPAI VAPVAMLGTF TVMLLTGFSI NVLTMFGMVL AIGIIVDDAI VVVENVERLM
VEEGLSPKDA TIKAMKEITG AIIGITLVLT AVFLPMAMSS GSVGVIYQQF TMSMAVSIMF
SALLALTLTP ALCATMLKPV EHGHHEKRGF FGWFNRRFDR MTNWYETRVG KLVGRTGRVM
LLFVAISTAL VFGFRMLPSS FLPEEDQGYF MTGFLLPSDS TVERTGDVVK TLEKHLASRP
GIESSISIIG YGFSGLGSNA ALNYAVLKDW DKREGATAMD EAMRAQAAMG GVTEGTVMSL
LPPAIDGLGT SSGFTMRLQD RANQGYAALK AAEAKLLELA AQSKVVTGVY PDSLPAGTSV
KLDIDREKAE ALGVSFTTIS DTLSAAMGST YVNDFPNAGR MQQVIIQADA PARMQIENVM
KLYVRNATGG MVPLSEVVRP VWSETPLQLV RFQGYPSARI SGGSAPGYSS GAAMAEMEHL
AAQLPPGFTV AWTGQSLQER ESASQAPMLM ALSMVVVFLV LAALYESWAI PLSVMLVVPL
GLIGALGAVM LRGMPNDVFF KVGMITVIGL SAKNAILIVE VAKQLREEGM GLIESAVQAS
KLRLRPILMT SLAFGLGVVP LMIATGASAE TQHAIGTGVF GGMVTATVLA IFFVPVFYVF
VMSIQERISA WRASGKKPAT VTHEHEG
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