Gene Bcep18194_C6727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C6727 
Symbol 
ID3733815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp247380 
End bp248783 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content65% 
IMG OID637760433 
Productdiguanylate cyclase 
Protein accessionYP_366420 
Protein GI78059845 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA ATGCCGCCAC CCAAGCGTCG ACCCGCACTG CCCAAGTCGT CACCCGGGTG 
TACGCGAGGC TCCTGCTGGT CGGCTTCGCG CTGGTGCCTG CGTATCTGAT CGCCTACCTG
TACTTCTTCC AGGACCCGTC GCTGAAATTC GAGAATCACG CCTTTCACGA ACTGGCGATT
GCGGCCGCCA CGCTCGAAGG CGCGTTCGTC ACGTATGTCT GCTGGCGCTG CTATCGCCTG
TCGGGCGAGC CGTTGCTGCG CTGGCTTACG CTGGGCTTTC TGGGCTTTTC GCTCGTCTAT
GCGTTGCATG GCGCGTTCAC CGGCATGGCG CATCACAATA TCTGGCTGTT CCTGCTGTAC
GGGCCGGCGT CGCGCCTGAC CATGTCGATC CTGATCTTCG TCGGGCAGCT CACCTATAGC
CGCAAGGCCG ACAGCGCGGC AACCCGCGCC GATCCCCGCA TCTGGTTACC CTGGCTCGCG
CTGTTCGGGC TCGTCGACGT TGCGGTCGCC GTGATCGCTT TCTCCCCCAT GGCCGGCAAC
CTGTGGGTAC GCCTGTCGAT GGAGGGCGGC GCACTGCTGC TCTCGGTCGT GAACGTCGTC
GCGCTGGTCG TGCGCCGCAT CCGCTCGCCG CTGATGACGA TCTACGGCAT CTCGGTCACG
TCGTTCGCGC TCTCGTCGCT CGCCTTCATC CTCGGGCGGC CGTGGAATCA CATGTGGTGG
CTGGCGCATG CGATTTTCGC GGCCGGCTTC TTCCTGCTCA GTTTCGGCGT GGTGCAGGCC
TTTCAAACGA CCCGTTCGTT TTCGAAGATC TACAGCCAGG CGGAACTGTT TGCCCGGTTG
CGGGAAGCAA TGGCCAGGAC GGAGCGCGCG CTGCAGGCGC TGCAACGGAC CAACGAAAAG
CTCGAGCATC TGGCGGCCAC GGACCCGCTC ACGGGCGCGA CCAACCGGCG GCAATTCATC
GAAAGCGTGG AGGCGGAAAT CCACCGCGCC AAGCGCAATG GCGCGCCGTT CTCGTTGCTC
GCGCTCGATC TCGACCACTT CAAGGCGATC AACGACAGTT ACGGGCATCA GGCGGGCGAT
CAGGTGTTGC AACGCTTCGT CGACAAATGC GTCGATGCGA TCCGGCCGTA CGATGGCGTC
GCGCGGGTGG GCGGAGAGGA ATTCATGGTG CTGCTGCCGC AAGCCGCGCT GGACACCGCC
CAGTCGATCG GCGAACGCAT CCGCGCGGCG ATCGCGGGCG CGCCGTTCGA GGCAGGCATC
GGCGAACCGA TCAAGGTCAC CGTGAGCGTC GGCGCGTCCG AATTCGGTCG GGATGGCGAA
ACGATCGACG CGATCCTGCG CAAGGCGGAC GAACGCCTGT ACCGCGCGAA GCATCTAGGT
CGCAACCAGG TGGTCGCCGG GTAA
 
Protein sequence
MTVNAATQAS TRTAQVVTRV YARLLLVGFA LVPAYLIAYL YFFQDPSLKF ENHAFHELAI 
AAATLEGAFV TYVCWRCYRL SGEPLLRWLT LGFLGFSLVY ALHGAFTGMA HHNIWLFLLY
GPASRLTMSI LIFVGQLTYS RKADSAATRA DPRIWLPWLA LFGLVDVAVA VIAFSPMAGN
LWVRLSMEGG ALLLSVVNVV ALVVRRIRSP LMTIYGISVT SFALSSLAFI LGRPWNHMWW
LAHAIFAAGF FLLSFGVVQA FQTTRSFSKI YSQAELFARL REAMARTERA LQALQRTNEK
LEHLAATDPL TGATNRRQFI ESVEAEIHRA KRNGAPFSLL ALDLDHFKAI NDSYGHQAGD
QVLQRFVDKC VDAIRPYDGV ARVGGEEFMV LLPQAALDTA QSIGERIRAA IAGAPFEAGI
GEPIKVTVSV GASEFGRDGE TIDAILRKAD ERLYRAKHLG RNQVVAG