Gene Bcep18194_C6628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C6628 
Symbol 
ID3733945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp129062 
End bp129679 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content55% 
IMG OID637760330 
ProductHAD family hydrolase 
Protein accessionYP_366322 
Protein GI78059747 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.563326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0579332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAAAGG CGATCTTCTT CGACTACGAT GGGGTGCTGA CGACGGATAG AACCGGGTCG 
GTCACGACAA TCCGATACCT GAGCGGACAG TTCGGCGTCG AGTACGACAT TCTTCGGAAT
GCCTTTGCTC GCCATAACGC GGACCTGTTG CTTGGAAAGA CGACGCACAA CGCGATATGG
CGAGCCGTCT GTGAGTCGGT TCGGCATGAG CTCGATTTCG GCTGGCTTGA AGCGGCATTT
TTGAGCACGC CGGCGAACGC CGGAATGTTT GACCTCGCTC GACGCCTGGA ACCGTTTTAT
GCGCTGGGAA TCATCACGGA TAACAAGAAG GACCGAATCG ATTGTCTGCG GAAGGCTCAG
CGGCTCGACG ATCTGTTCGA TCCGATTGTC GTGTCCGCGG AAAGAGGATC AGGCAAGGAA
GGGGCTGCAG TATTCGAGTA CGCATTAGGC TGTCTCGATG TGAAGCCGGA AGAAGCCATT
TTTATCGACA ACACACCCGA AAACCTGATT GCCCCGAGAC AGTTGGGCAT GCACGCGATC
CTGCACGATG ACAGCCGGAA CGATATCGAC GGATTGATCG CGACGTTGAC GACGGAATTC
GATCTCAGGT TGAGCTGA
 
Protein sequence
MIKAIFFDYD GVLTTDRTGS VTTIRYLSGQ FGVEYDILRN AFARHNADLL LGKTTHNAIW 
RAVCESVRHE LDFGWLEAAF LSTPANAGMF DLARRLEPFY ALGIITDNKK DRIDCLRKAQ
RLDDLFDPIV VSAERGSGKE GAAVFEYALG CLDVKPEEAI FIDNTPENLI APRQLGMHAI
LHDDSRNDID GLIATLTTEF DLRLS