| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C6556 |
|---|
| Symbol | |
|---|
| ID | 3734143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007509 |
|---|
| Strand | + |
|---|
| Start bp | 41853 |
|---|
| End bp | 43337 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637760259 |
|---|
| Product | putative outer membrane efflux protein MdtP |
|---|
| Protein accession | YP_366251 |
|---|
| Protein GI | 78059676 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT CATTGATTCG ATCCTTCTGT CTGTTGTTGC GTCATATCGC TGTCACCGCG
CTTCTGTGCG GCTCGGCCGC GTGCGCATTG ATCCATCGCG ACGTGAAGCC GTCGGCGACG
CTCGATCCCG AGCGCATTCG CATTGCCAAC GACATTCATT TGGCGAACGA CGGCTGGCCG
TCGGCACGCT GGTGGATGCG GTACGGCGAT CCGCAACTGG ACGCGCTGGT CGATCGCGCG
CTTGCGGATT CGCCTACGAT AGCGAGTGCC CATTCGAGGG TCTCGCAGGC CAAGGCCGAC
GTCGACCTGG TAAAGGCGGG CACCAGTCTG CAGGTGAGCG CGCTCGGATC GGTGAACCGG
GAGCGTGTGT CGAGCAACGG CTTCCTGAGC GCCTATTCAG GCAACCAGCC AATGTTGGGG
GCGAGTGGTC CGTGGTACAC GGAAGGTGTC GTCGGCCTTG GTGCAAGTCT CGACGTCGAT
ATCTGGGGCA AGCAGCGCGC CCAAGTGGCG GCGGCACTGG GCGTTCACAA TGCGCGGGTG
GTCGAGACGT CGGCGATCGA GCTGGAAATC TCGGCCGACG TCGCGCAGAT TTACTACGGA
ATTCAGACTA CCTATCATCT CATCGATCTG CTGGAGCAAC TGCACGACAT TGTGACGTTC
TCAATGAACG CGCACGCCGC TCGTGCTTCG CGTGGGCTCG AACCGCAGAC GCAGACGGAG
ATCGCTCGCT CGCAAAAACT GGCGACAGAG CGGCAGATCG TGGCTGCCCG AGGGCGCATC
CAGCAACTAC GCGAATCGTT GCGCGCGCTG ATAGGTGCGG GGGCGGTGGA TCTTGCAGAG
ATTCGGCCCG TGGCGTTGCC GACACCGCCG TCGTCGTTGC CTGCGACGCT CTCGTTCGAA
CTGCTGGCGC GGCGCCCGGA CCTGCAGGCG ATGCGTTGGT ATGTCGAAGG GTCTTTCGAC
AAGATCGATG CAGCTAAGGC CGCGTTCTAT CCGAGCTTCG ATATCAAGGC ATTCTTCGGC
GTCAACGCAT TGCATTTGGG CGACCTGTTC ACGCACGCGA GCCAGCAGAT CAATCTCGTT
CCAGGCCTGT ACCTGCCGAT ATTTGACGGA GGTCGACTCA ACGCGAACCT TGGCGGCGCC
CGTAGCGCAA GCAATCTGCT GATTCTGCAG TACAACCAGG CGATTCTTAA CGCCGTACGC
GATATCGCCA CAACGGGCAG CCAGCTGCAG GACCTCGATG CCGAGGCGAA GCTGCAAACA
GAGAAGATCC AGGCGACGAC GTTTTCCCAG GACAGCGCCG ACGCCCAATA TCAGCGCGGC
TTGGCGAGCC GGTTGACTGC GGTCGAGGCG AAGCAGGCCG TGATCCTGGA GCGGGTCGCG
CTGCTCGACC TCGACGGCCG GCGAATCGGC CAAGACATCG CGTTGACCAA GGCGCTAGGC
GGTGGCTACC GGTCGGATGC GCCAGTTGTG CTGAACCCAC GGTAA
|
|---|
| Protein sequence | MTDSLIRSFC LLLRHIAVTA LLCGSAACAL IHRDVKPSAT LDPERIRIAN DIHLANDGWP
SARWWMRYGD PQLDALVDRA LADSPTIASA HSRVSQAKAD VDLVKAGTSL QVSALGSVNR
ERVSSNGFLS AYSGNQPMLG ASGPWYTEGV VGLGASLDVD IWGKQRAQVA AALGVHNARV
VETSAIELEI SADVAQIYYG IQTTYHLIDL LEQLHDIVTF SMNAHAARAS RGLEPQTQTE
IARSQKLATE RQIVAARGRI QQLRESLRAL IGAGAVDLAE IRPVALPTPP SSLPATLSFE
LLARRPDLQA MRWYVEGSFD KIDAAKAAFY PSFDIKAFFG VNALHLGDLF THASQQINLV
PGLYLPIFDG GRLNANLGGA RSASNLLILQ YNQAILNAVR DIATTGSQLQ DLDAEAKLQT
EKIQATTFSQ DSADAQYQRG LASRLTAVEA KQAVILERVA LLDLDGRRIG QDIALTKALG
GGYRSDAPVV LNPR
|
|---|
| |