Gene Pcar_R0054 details

Gene Information

• Locus tag: Pcar_R0054
• ID: 3725046
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 2752734
• End bp: 2755689
• Gene Length: 2956 bp
• GC content: 54%
• IMG OID: 640710077
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.175608
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGTCAAGCTA CTAAGGGCGT ACGGTGGATG CCTTGGCATC GGGAGGCGAT GAAGGACGTG 
GTAAGCTGCG AAAAGCTTCG GTTAGCCGCT AAACAGGCTT TGATCCGGAG ATGTCCGAAT 
GGGGAAACCC GGCAGGGATG ATGCCCTGTC ATCTTACACT GAATCCATAG GTGTATGAGG 
CGAACGAGGG GAACTGAAAC ATCTAAGTAC CCTCAGGAGA AGAAATCAAT TGAGATTCCG 
TAAGTAGCGG CGAGCGAACG CGGATTAGCC CAAACCGAAG TTACTCCGGT GACTTCGGGG 
TTGTGGGGCC CCAACGTGGG ATTGATGAGA GGTAGCAAAA GGCTCTGGAA AGTGCCGCCA 
TAGTGGGTGA TAGCCCCGTA TGCGAAACCT TGATTCACCC TAGGGTGTCC CCGAGTACCA 
CGGAACACGT GAAATTCTGT GGGAAGCTGG GAGGACCATC TTCCAAGGCT AAATACTCCC 
CGATGACCGA TAGCGCATAG TACCGTGAGG GAAAGGTGAA AAGAACTGCG ATAAGCAGAG 
TGAAATAGAA CCTGAAACCG TACGCTTACA AGCAGTGGGA GCCCTATGTC TTCGGACAGG 
GTGACCGCGT GCCTTTTGCA TAATGAGTCA GCGAGTTACT CTCAGCAGCG AGGTTAAGCC 
GTTAGGTGGA GCCGCAGCGA AAGCGAGTCT TAATAGGGCG CTTGAGTTGC TGGGAGTAGA 
CCCGAAACCG AGTGATCTAT CCATGGGCAG GGTGAAAGGA AGGTAACACT TCGTGGAGGC 
CCGAACCCAC TTAGGTTGAA AACTGAGGGG ATGACCTGTG GATAGGAGTG AAAGGCTAAT 
CAAACTCGGA GATAGCTGGT TCTCCCCGAA ATATATTTAG GTATAGCCTC GTATGAATCG 
TTCCGGAGGT AGAGCACTGA ATGGGCTAGG GGTCCTACCA GATTACCAAA CCTAATCAAA 
CTCCGAATGC CGGAAACGTC TGTACGGGAG TCAGACTGCG GGTGATAAGG TCCGTAGTCG 
AGAGGGAAAC AACCCAGATC GCCAGCTAAG GTCCCTAAGT CTGTGCTAAG TGGGAAAGGA 
TGTGGGAATG CTTAGACAAC CAGGAGGTTG GCTTAGAAGC AGCCACCCTT TAAAGAAAGC 
GTAATAGCTC ACTGGTCAAG TGGGCCCGCG CCGAAAATGT AACGGGGCTA AGCACAGCAC 
CGAAGCTGCG GATTTGTACC TTAAGGTACA AGTGGTAGGG GAGCATTGTA GCAACCGCTG 
AAGGTCGACC GCGAGGACGG CTGGAGGAAC TACAAGAGAT TATGCTGACA TGAGTAGCGC 
AAATGCGGGT GAGAAACCCG CACGCCGTAA GCCCAAGGTT TCCTCAGTAA AGGTAATCTG 
CTGAGGGTAA GTCGGCCCCT AAGGCGAGGC CGAAAGGCGT AGTTGATGGG AAACAGGTTA 
ATATTCCTGT ACCTCTTATG ACTGCGATGG GGGGACGGAG AAGGGTAGGC CAGCCGGGTG 
ATGGACGTCC CGGTTCAAGC GTGTAGGCGG GAGCGGTAGG TAAATCCGCT GCTCCATTGA 
CAACGCCAAG GCGTGATGAC GAGGGCTTAA AGCCCACAAA GTGGTTGATC CCATGCTTCC 
AAGAAAAGCC TCTAAGCTTC AGGTCATAAG AGACCGTACC GAAAACCGAC TCAGGTGGGC 
GGGCAGAAAA TGCTAAGGCG ATTGAGATAA CTCTGGTTAA GGAACTCGGC AAAATGACAC 
CGTAACTTCG GGAGAAGGTG TGCCCCCATT AGGTGAAGCG ATTTACACGT GGAGCCGAAG 
GGGGTCGCAG AGAAATGGCG GTAGCGACTG TTTACTAAAA ACACAGCACT CTGCAAACTC 
GTAAGAGGAC GTATAGGGTG TGACGCCTGC CCGGTGCCGG AAGGTTAAGG GGATTAGTCA 
GCGCAAGCGA AGCTTTGAAC CGAAGCCCCG GTAAACGGCG GCCGTAACTA TAACGGTCCT 
AAGGTAGCGA AATTCCTTGT CGGGTAAGTT CCGACCTGCA CGAATGGCGT AACGACTTCC 
GCACTGTCTC AACCAGGGAC TCAGCGAAAT TGAATTCTCG GTGAAGATGC CGAGTACCCG 
CGGCAAGACG GAAAGACCCC GTGAACCTTT ACTACAGCTT GGCAGTGACG TTCGGGACAG 
CATGTGTAGG ATAGGTGGGA GACTTTGAAG CTGGCACGCC AGTGTCGGTG GAGTCGTCCT 
TGAAATACCA CCCTTGTTCT TCTGGTCGTC TAACCTAGGC CCGTTATCCG GGTCAGGGAC 
ACTGCCTGGT GGGTAGTTTG ACTGGGGCGG TCGCCTCCCA AAGAGTAACG GAGGCGCGCG 
AAGGTTCCCT CAGGCTGATT GGAAACCAGC CGTAGAGTGC AAAGGCATAA GGGAGCTTGA 
CTGCAAGACA GACACGTCGA GCAGGTGCGA AAGCAGGTCT TAGTGATCCG GCGGTTCTGT 
ATGGAAGGGC CGTCGCTCAA CGGATAAAAG GTACTCCGGG GATAACAGGC TTATCTCCCC 
CAAGAGTTCA CATCGACGGG GAGGTTTGGC ACCTCGATGT CGGCTCATCA CATCCTGGGG 
CTGGAGCAGG TCCCAAGGGT TTGGCTGTTC GCCAATTAAA GTGGTACGCG AGCTGGGTTT 
AAAACGTCGT GAGACAGTTT GGTCCCTATC TGCCGTGGGC GTAGGAGATT TGAGAGGATC 
TGTCCTTAGT ACGAGAGGAC CGGGATGGAC GAACCTCTGG TGTTCCAGTT GTTCCGCCAG 
GAGCAATGGC TGGGTAGCTA CGTTCGGAAA GGATAACCGC TGAAAGCATC TAAGCGGGAA 
GCCCCCCTCA AGACGAGATC TCCCTGGGCG CAAGCCCCTA AAGGTCCGTT GGAGACGACA 
ACGTTGATAG GCCGGGTGTG TACGCACAGC AATGTGTTTA GCTAACCGGT ACTAATTGAC 
CGTGAGGCTT GACCAT 

 

Protein sequence