Gene Pcar_3125 details

Gene Information

• Locus tag: Pcar_3125
• Symbol: tkt
• ID: 3725833
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 3643639
• End bp: 3645633
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637752737
• Product: transketolase
• Protein accession: YP_358530
• Protein GI: 77920715
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast; [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACATG AACGTCTGGA TCAGAAGCTG GCTCGCGAAT CTATCGATAC CGTCCGTCTG 
CTTGCCGCCG ACGCGGTCGA AAAGGCGCGC TCCGGGCATC CCGGAACGCC CATGGAAGCC 
GCTCCCATCG CTTACCTTCT CTATACCCGT CACCTGCGAC ACAACCCGGA CAATCCCGAT 
TGGCCGGGCC GCGACCGGTT TCTTTTGTCC TGCGGGCATG CCTCCATGCT GCTTTACAGT 
ATGCTGCATC TGACGGGTTA CGACCTGTCG ATGGAGGACC TGAAACAGTT TCGGCAGCTC 
GATAGTCGTA CGCCCGGACA TCCGGAATTC GGCCATACGC CCGGCGTGGA AACGACCACA 
GGGCCACTCG GTCAAGGGGT GGCGGTCGGC GTCGGCATGG CCATGGGCGC ACGGCTGCTG 
GCGGACAAGG TGCATCCGGA ATTGTTCGAT TACCGCATCT ACGCCTTATG TTCCGACGGC 
GACATGATGG AGGGGGTCGC GGCGGAAGCG GCTTCGCTGG CCGGTCATCT GCAGTTGGGC 
AACATGATTT ATGTCTATCT CGACAATCGT ATTACCATCG AGGGCGGCAC CGACCTGGCT 
TTCAGTGATG AAACGGCCAG CCGATTTCTT TCTTACGGCT GGCATGTGCA ACATGTCGAA 
GGTGAAAACC TGACGGAAAT CGATGCAGCG CTGGTTTCGG CCCGCAGGGA TCCGCGCCCC 
TCTCTGATCA TCGCCCGCAC CCATATCGGC ATAGGCGCTC CGCACAAGCA GGATACCGCC 
GAGGCCCACG GCGCGCCGCT GGGAGCGGAA GAGCTGCAAT TGACCAAGGA ATTTTACGGC 
CGGGATCCCG ACCTCGCCTT CCAGGTTCCC CAATCAGTCG CGCAGCATAT GGCGGAGGCC 
AAACTGCGGG GCAAATATCA GGAACAGACC TGGCAGGAGC ACCTGAGGCA AGCCCTTGCC 
GCCAATCATC CGAACCTCGC AGCCTGGCAA CAGGGCCAAG CTGCCGGCAT ACCGTCCGAT 
TGGCAAGCTG CCCTGCCCTG TTTCAGCGTC GATGACGGTG CTCTGGCAAC CCGTCAGGCC 
AGCGGTCTGA CCCTCAATGC GCTGGCAGAA AAAATTCCTT TGCTGGTGGG TGGCTCCGCC 
GACCTGGCGC CATCCAACAA CACGGCACTC AAAAAGGCCG GATCTTTCAG GCCGGGTAAA 
GCCGACCGGA ATATCCATTT CGGTGTACGC GAACATGCCA TGGGGGCTAT TCTCAACGGT 
TTGGCCCATA CCCCGGGGTT GATTCCTTTC GGCGGCACCT TCCTGGTTTT TTCCGATTAC 
ATGCGCCCGC CCATGCGGCT TGCCGCCATG ATGGGGCTGG CGCCGATCTA CGTTTTCACC 
CACGATTCCA TCGGTTTGGG CGAAGACGGA CCCACCCATC AACCGGTCGA GCATCTGGCC 
GCTTTGCGTG CCATTCCCAA CCTTACGGTG ATTCGCCCCT GCGACGCCAA CGAAACGGTA 
CAGGCCTGGC GTGCAGCCCT GGAAAATCGT CGCGGGCCGA CGGCACTGGT GTTGACACGT 
CAGAAACTGC CGGTGCTCGA TCGTCATATG CATGGCGGTG CCGAAAATTT ACAGCGCGGC 
GGCTACGTTC TGGCCCGGGA GCAAAGCACC CTGAGGGTGT TGATTATCGC CAGTGGTTCA 
GAGGTTCAGA TCGCTCTTGA GGCGCGGTCC CTGTTGCAGT CCGAGGGGTA CGGCGTCAGG 
GTGGTCTCCT TGCCCAGCTG GGAACTTTTC GAAACTCAGA CGCAAGCTTA TCGCGACGAG 
GTGCTGCCTC CCGGCGACGC GTTACGGGTG GCCGTTGAAG CCGGTATCGG TATGGGGTGG 
GAGCGCTACC TCGGTCATTC CGGCATGCTG ATTTGCATGG ACGGTTTTGG CGCCAGTGCT 
CCCGGTGGCG AGTTGATGAA AAAATTCGGG TTTACCTGCG AGCATCTTGT GAACCGAATA 
AAAATGCAAT TATGA 

 

Protein sequence

MEHERLDQKL ARESIDTVRL LAADAVEKAR SGHPGTPMEA APIAYLLYTR HLRHNPDNPD 
WPGRDRFLLS CGHASMLLYS MLHLTGYDLS MEDLKQFRQL DSRTPGHPEF GHTPGVETTT 
GPLGQGVAVG VGMAMGARLL ADKVHPELFD YRIYALCSDG DMMEGVAAEA ASLAGHLQLG 
NMIYVYLDNR ITIEGGTDLA FSDETASRFL SYGWHVQHVE GENLTEIDAA LVSARRDPRP 
SLIIARTHIG IGAPHKQDTA EAHGAPLGAE ELQLTKEFYG RDPDLAFQVP QSVAQHMAEA 
KLRGKYQEQT WQEHLRQALA ANHPNLAAWQ QGQAAGIPSD WQAALPCFSV DDGALATRQA 
SGLTLNALAE KIPLLVGGSA DLAPSNNTAL KKAGSFRPGK ADRNIHFGVR EHAMGAILNG 
LAHTPGLIPF GGTFLVFSDY MRPPMRLAAM MGLAPIYVFT HDSIGLGEDG PTHQPVEHLA 
ALRAIPNLTV IRPCDANETV QAWRAALENR RGPTALVLTR QKLPVLDRHM HGGAENLQRG 
GYVLAREQST LRVLIIASGS EVQIALEARS LLQSEGYGVR VVSLPSWELF ETQTQAYRDE 
VLPPGDALRV AVEAGIGMGW ERYLGHSGML ICMDGFGASA PGGELMKKFG FTCEHLVNRI 
KMQL