Gene Pcar_3108 details

Gene Information

• Locus tag: Pcar_3108
• ID: 3725815
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: +
• Start bp: 3625953
• End bp: 3626645
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637752719
• Product: hypothetical protein
• Protein accession: YP_358513
• Protein GI: 77920698
• COG category: [S] Function unknown
• COG ID: [COG2930] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 58
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGAAGC CGAAAGGTTA TATACGTCTG CTGGCCGGTA TGCTGACCAT GCTGGGACTG 
CTCTGGAGCG GTTCGGCACC GGCCGCCGAG CAGGAAACAA CCGTCCACCA GGCTGTCGCC 
GTCCTCGACA AGATCATGGA GATTCCCGAA TCGGCCATAC CCCCCAGTCT GCTGGCCAAT 
GCCTACGGGA TCGCCATCAT TCCCGGGGTG GTCAAGGGGG CCTTCATCAT CGGCGGGCGT 
TATGGGGAAG GGGTGCTGCT GGTACGTACT CCCGGGGGAG GGTGGAGCAA TCCGACCTTC 
CTGTCCATCG GCGGTGGCAG CTTCGGCTGG CAGATCGGCG GTCAGTCAAC GGATGTCATC 
CTGGTGTTCA AGAGCCAACG CAGCATTGAA GACATCAAAC GAGGCAAATT CACCCTCGGC 
GCCGACGCGG CGGTGGCCGC CGGGCCAGTG GGACGAAGGG TGGAAGGCGC CACCGACGTG 
ATGCTCAAGG CGGAGATTCT ATCCTACAGC CGTTCCCGGG GATTTTTTGC CGGCGTTTCC 
CTGGAAGGCT CGGTGCTGAA TATCCTCTGG CAGGACAATG CCGCCTATTA CGGGCGACAA 
AATGTTACGG TCGAGGATAT TTTCTCCGGC CGCGTCCGCG GACCGGCCTC GGCGACAACC 
TTGCGCAGGA CAGTGGACAC GTACGCGCCT TAG 

 

Protein sequence

MLKPKGYIRL LAGMLTMLGL LWSGSAPAAE QETTVHQAVA VLDKIMEIPE SAIPPSLLAN 
AYGIAIIPGV VKGAFIIGGR YGEGVLLVRT PGGGWSNPTF LSIGGGSFGW QIGGQSTDVI 
LVFKSQRSIE DIKRGKFTLG ADAAVAAGPV GRRVEGATDV MLKAEILSYS RSRGFFAGVS 
LEGSVLNILW QDNAAYYGRQ NVTVEDIFSG RVRGPASATT LRRTVDTYAP