Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_3102 |
Symbol | |
ID | 3725809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 3618703 |
End bp | 3619644 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637752713 |
Product | TPR repeat-containing protein |
Protein accession | YP_358507 |
Protein GI | 77920692 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0000142669 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTGTC CCCGTTGTCA GGCGGTTGTT TCGGAACAAG CCAAATTCTG TGAGTTGTGT GGAATAAAAC TCGAACGCGA TGCCCGATCC CTGCATGAAG AAGCGGTCGA CCTTTACCAT CGCGGGCAGG TCGAGCAGGC GCTGTCGCTG TGGAAGGAGG CGCTGAAACT GGAACCCGAC TTCAGCCAGG CGCACTACTA CATCGGGCTG GCGCTGTACG ATCAAGGGGA TCTGCCCCGC GCTATCAAGG CCTTTCGAGC GGCCCTGGCC GAGTCCCGGG AACCGTTCCG CATCCTCTTC AAGCTCGGCC TGGCACAGTA CGGCCTGGGG GATCTTGCCG CCAGCGTGGC AAGTTTCAAA CAGGCCCTGC AAGTCAATCC CGCCAGTGCC GAAACCTGTT ATCGGTTGGG ATTGTCCTAT CTGCGGCAAT CCGACCTGGA GCAGGCCCGT GCCGCCCTCG ACGACGCCAT CCGGCTCAAT CCCAAATATA CCCGGGCGCT TTTTATCCTG GGAATGATCT ATTCCCAGCA AGGCAATCCT ACCGAGGCCA TCCGCCTGTT CCGTCAAGTC GAGCAGGCCA GTCCGGACTA TACCGAGGCC TGTTTCGAGT TGGGGATGGC ACTGTTGCGT AACGGCGAAC TGGACGAGGC CGCTGCGCAG TTCGAAAAAA CAACGGTCAA CAGCCCCCGC TTTACGCCGG CCCATTTTAT GCTGGGCGAA GCGCGACGGC GGGCCGGCAA ACTGTCGGAA GCCATCAGCG CCTATCGGCA GGCGCTGGAA CAGAATCCCC GCGATACCGA AGGCTGGCTG CATCTGGCGG AATGCCAGGC GCGCCTCGGG CAGACCGATG CCGCCCGCGA AGCCCTCGAC AAGGTTCTGT CTCTCCACCC GGAACATCAC CAGGCAAAAG CCCTGGCAGA GCAGTTGACC AAGACCCTCT GA
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Protein sequence | MRCPRCQAVV SEQAKFCELC GIKLERDARS LHEEAVDLYH RGQVEQALSL WKEALKLEPD FSQAHYYIGL ALYDQGDLPR AIKAFRAALA ESREPFRILF KLGLAQYGLG DLAASVASFK QALQVNPASA ETCYRLGLSY LRQSDLEQAR AALDDAIRLN PKYTRALFIL GMIYSQQGNP TEAIRLFRQV EQASPDYTEA CFELGMALLR NGELDEAAAQ FEKTTVNSPR FTPAHFMLGE ARRRAGKLSE AISAYRQALE QNPRDTEGWL HLAECQARLG QTDAAREALD KVLSLHPEHH QAKALAEQLT KTL
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