| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3102 |
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| Symbol | |
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| ID | 3725809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 3618703 |
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| End bp | 3619644 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637752713 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_358507 |
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| Protein GI | 77920692 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0000142669 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTGTC CCCGTTGTCA GGCGGTTGTT TCGGAACAAG CCAAATTCTG TGAGTTGTGT
GGAATAAAAC TCGAACGCGA TGCCCGATCC CTGCATGAAG AAGCGGTCGA CCTTTACCAT
CGCGGGCAGG TCGAGCAGGC GCTGTCGCTG TGGAAGGAGG CGCTGAAACT GGAACCCGAC
TTCAGCCAGG CGCACTACTA CATCGGGCTG GCGCTGTACG ATCAAGGGGA TCTGCCCCGC
GCTATCAAGG CCTTTCGAGC GGCCCTGGCC GAGTCCCGGG AACCGTTCCG CATCCTCTTC
AAGCTCGGCC TGGCACAGTA CGGCCTGGGG GATCTTGCCG CCAGCGTGGC AAGTTTCAAA
CAGGCCCTGC AAGTCAATCC CGCCAGTGCC GAAACCTGTT ATCGGTTGGG ATTGTCCTAT
CTGCGGCAAT CCGACCTGGA GCAGGCCCGT GCCGCCCTCG ACGACGCCAT CCGGCTCAAT
CCCAAATATA CCCGGGCGCT TTTTATCCTG GGAATGATCT ATTCCCAGCA AGGCAATCCT
ACCGAGGCCA TCCGCCTGTT CCGTCAAGTC GAGCAGGCCA GTCCGGACTA TACCGAGGCC
TGTTTCGAGT TGGGGATGGC ACTGTTGCGT AACGGCGAAC TGGACGAGGC CGCTGCGCAG
TTCGAAAAAA CAACGGTCAA CAGCCCCCGC TTTACGCCGG CCCATTTTAT GCTGGGCGAA
GCGCGACGGC GGGCCGGCAA ACTGTCGGAA GCCATCAGCG CCTATCGGCA GGCGCTGGAA
CAGAATCCCC GCGATACCGA AGGCTGGCTG CATCTGGCGG AATGCCAGGC GCGCCTCGGG
CAGACCGATG CCGCCCGCGA AGCCCTCGAC AAGGTTCTGT CTCTCCACCC GGAACATCAC
CAGGCAAAAG CCCTGGCAGA GCAGTTGACC AAGACCCTCT GA
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| Protein sequence | MRCPRCQAVV SEQAKFCELC GIKLERDARS LHEEAVDLYH RGQVEQALSL WKEALKLEPD
FSQAHYYIGL ALYDQGDLPR AIKAFRAALA ESREPFRILF KLGLAQYGLG DLAASVASFK
QALQVNPASA ETCYRLGLSY LRQSDLEQAR AALDDAIRLN PKYTRALFIL GMIYSQQGNP
TEAIRLFRQV EQASPDYTEA CFELGMALLR NGELDEAAAQ FEKTTVNSPR FTPAHFMLGE
ARRRAGKLSE AISAYRQALE QNPRDTEGWL HLAECQARLG QTDAAREALD KVLSLHPEHH
QAKALAEQLT KTL
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